Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.18□□□□□ -2.44
SDCBPO00560 RPL23AP54-201ENST00000495129 419 ntBASIC-0.18□□□□□ -2.44
SDCBPO00560 AC011352.1-201ENST00000512300 793 ntBASIC-0.18□□□□□ -2.44
SDCBPO00560 SNORA18.4-201ENST00000516440 124 ntBASIC-0.18□□□□□ -2.44
SDCBPO00560 RNU6-966P-201ENST00000516479 104 ntBASIC-0.18□□□□□ -2.44
SDCBPO00560 LRRC34P1-201ENST00000542742 915 ntBASIC-0.18□□□□□ -2.44
SDCBPO00560 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.18□□□□□ -2.44
SDCBPO00560 AC010332.2-201ENST00000613083 1904 ntBASIC-0.19□□□□□ -2.44
SDCBPO00560 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
SDCBPO00560 SNORA9.1-201ENST00000362412 131 ntBASIC-0.19□□□□□ -2.44
SDCBPO00560 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.19□□□□□ -2.44
SDCBPO00560 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.19□□□□□ -2.44
SDCBPO00560 SNORA72-201ENST00000384339 132 ntBASIC-0.19□□□□□ -2.44
SDCBPO00560 RNU6-127P-201ENST00000390897 107 ntBASIC-0.19□□□□□ -2.44
SDCBPO00560 MIR548H2-201ENST00000408874 88 ntBASIC-0.19□□□□□ -2.44
SDCBPO00560 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.19□□□□□ -2.44
SDCBPO00560 SEPT14P3-201ENST00000439401 183 ntBASIC-0.19□□□□□ -2.44
SDCBPO00560 MTND4LP16-201ENST00000440828 295 ntBASIC-0.19□□□□□ -2.44
SDCBPO00560 AL732372.2-207ENST00000445840 183 ntBASIC-0.19□□□□□ -2.44
SDCBPO00560 SEPT14P2-201ENST00000453405 183 ntBASIC-0.19□□□□□ -2.44
SDCBPO00560 SEPT14P4-201ENST00000513445 186 ntBASIC-0.19□□□□□ -2.44
SDCBPO00560 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.19□□□□□ -2.44
SDCBPO00560 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.19□□□□□ -2.44
SDCBPO00560 AC105029.1-201ENST00000520250 669 ntBASIC-0.19□□□□□ -2.44
SDCBPO00560 FO082796.1-201ENST00000523795 183 ntBASIC-0.19□□□□□ -2.44
SDCBPO00560 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.19□□□□□ -2.44
SDCBPO00560 RNU6-451P-201ENST00000362921 107 ntBASIC-0.2□□□□□ -2.44
SDCBPO00560 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.2□□□□□ -2.44
SDCBPO00560 Y_RNA.553-201ENST00000384670 102 ntBASIC-0.2□□□□□ -2.44
SDCBPO00560 MIR125B2-201ENST00000385128 89 ntBASIC-0.2□□□□□ -2.44
SDCBPO00560 MIR643-201ENST00000385267 97 ntBASIC-0.2□□□□□ -2.44
SDCBPO00560 RNU6-332P-201ENST00000391193 108 ntBASIC-0.2□□□□□ -2.44
SDCBPO00560 MTCO3P40-201ENST00000392516 676 ntBASIC-0.2□□□□□ -2.44
SDCBPO00560 DEFB108C-201ENST00000400154 252 ntBASIC-0.2□□□□□ -2.44
SDCBPO00560 MIR1197-201ENST00000408818 88 ntBASIC-0.2□□□□□ -2.44
SDCBPO00560 SNORD12B-201ENST00000410433 91 ntBASIC-0.2□□□□□ -2.44
SDCBPO00560 RNU6-408P-201ENST00000515910 100 ntBASIC-0.2□□□□□ -2.44
SDCBPO00560 RNU6-273P-201ENST00000516937 96 ntBASIC-0.2□□□□□ -2.44
SDCBPO00560 AL512360.1-201ENST00000555346 234 ntBASIC-0.2□□□□□ -2.44
SDCBPO00560 SNORD92-201ENST00000585078 85 ntBASIC-0.2□□□□□ -2.44
SDCBPO00560 AC060780.3-201ENST00000589464 80 ntBASIC-0.2□□□□□ -2.44
SDCBPO00560 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.2□□□□□ -2.44
SDCBPO00560 DLEU2_1.1-201ENST00000612089 120 ntBASIC-0.2□□□□□ -2.44
SDCBPO00560 DLEU2_1.2-201ENST00000614667 120 ntBASIC-0.2□□□□□ -2.44
SDCBPO00560 AL359880.1-201ENST00000621879 266 ntBASIC-0.2□□□□□ -2.44
SDCBPO00560 MTND5P26-201ENST00000426018 1752 ntBASIC-0.2□□□□□ -2.44
SDCBPO00560 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.21□□□□□ -2.44
SDCBPO00560 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.21□□□□□ -2.44
SDCBPO00560 RNU6-324P-201ENST00000363957 106 ntBASIC-0.21□□□□□ -2.44
SDCBPO00560 RNU6-716P-201ENST00000365621 103 ntBASIC-0.21□□□□□ -2.44
SDCBPO00560 RNU6-483P-201ENST00000384088 108 ntBASIC-0.21□□□□□ -2.44
SDCBPO00560 RNU6-187P-201ENST00000384139 106 ntBASIC-0.21□□□□□ -2.44
SDCBPO00560 RNU6-364P-201ENST00000384387 107 ntBASIC-0.21□□□□□ -2.44
SDCBPO00560 MIR145-201ENST00000384967 88 ntBASIC-0.21□□□□□ -2.44
SDCBPO00560 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.21□□□□□ -2.44
SDCBPO00560 AC005042.3-201ENST00000453230 174 ntBASIC-0.21□□□□□ -2.44
SDCBPO00560 SNORD5.1-201ENST00000458800 75 ntBASIC-0.21□□□□□ -2.44
SDCBPO00560 RNU7-185P-201ENST00000459215 60 ntBASIC-0.21□□□□□ -2.44
SDCBPO00560 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.21□□□□□ -2.44
SDCBPO00560 RNU7-156P-201ENST00000517214 74 ntBASIC-0.21□□□□□ -2.44
SDCBPO00560 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.21□□□□□ -2.44
SDCBPO00560 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.21□□□□□ -2.44
SDCBPO00560 MIR7107-201ENST00000611489 80 ntBASIC-0.21□□□□□ -2.44
SDCBPO00560 DISC2.1-201ENST00000612827 205 ntBASIC-0.21□□□□□ -2.44
SDCBPO00560 AC240442.1-201ENST00000616055 283 ntBASIC-0.21□□□□□ -2.44
SDCBPO00560 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.22□□□□□ -2.44
SDCBPO00560 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 SNORA2A-201ENST00000383885 135 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 MIR593-201ENST00000384856 100 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 MIR644A-201ENST00000385262 94 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 RNU6-747P-201ENST00000390928 104 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 RNU6-700P-201ENST00000391043 107 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 RNU6-241P-201ENST00000391148 104 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 RNU6-447P-201ENST00000410293 104 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 RNU6-855P-201ENST00000410395 104 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 RNU6-355P-201ENST00000410427 104 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 RNU6-791P-201ENST00000410467 104 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 RNU6-705P-201ENST00000410601 104 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 RNU6-860P-201ENST00000410860 104 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 RNU6-785P-201ENST00000411324 104 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 RPL17P19-201ENST00000489069 552 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 AC019235.1-201ENST00000503847 207 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 RNA5SP268-201ENST00000516828 124 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 AC006362.1-201ENST00000567392 174 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 MIR3908-201ENST00000579798 126 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 U6.90-201ENST00000614007 104 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 U6.70-201ENST00000620287 104 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 AL391262.2-201ENST00000622466 494 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 AC124864.2-201ENST00000624736 186 ntBASIC-0.22□□□□□ -2.44
SDCBPO00560 RNA5SP117-201ENST00000365294 118 ntBASIC-0.23□□□□□ -2.45
SDCBPO00560 RNU6-442P-201ENST00000383968 104 ntBASIC-0.23□□□□□ -2.45
SDCBPO00560 RNU6-756P-201ENST00000383997 107 ntBASIC-0.23□□□□□ -2.45
SDCBPO00560 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 191 ms