Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 SNORA63C-201ENST00000364578 129 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 SNORA20B-201ENST00000384220 132 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 RNU6-903P-201ENST00000391270 109 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 AC137499.1-201ENST00000427602 88 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 AL353572.1-201ENST00000442490 417 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 RPL30P15-201ENST00000457129 321 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-0.39□□□□□ -2.47
CACNA1AO00555 RPL23AP75-201ENST00000491601 451 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-0.39□□□□□ -2.47
CACNA1AO00555 RNU6-765P-201ENST00000516916 99 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 AC090572.1-201ENST00000519251 160 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.39□□□□□ -2.47
CACNA1AO00555 MIR5591-201ENST00000578248 65 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 AC121247.2-201ENST00000604776 136 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 AL442067.1-201ENST00000613261 223 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 AC008873.1-201ENST00000625051 138 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 AL445984.1-201ENST00000637834 659 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 AC068137.4-201ENST00000638485 296 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 AC013437.2-201ENST00000639587 677 ntBASIC-0.39□□□□□ -2.47
CACNA1AO00555 RNU4-36P-201ENST00000364294 144 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 SNORD70.1-201ENST00000391007 85 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 FCF1P9-201ENST00000412546 282 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 HMGN2P32-201ENST00000444648 269 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 MRPS10P1-201ENST00000448483 130 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 snoU13.6-201ENST00000458785 104 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 RNU7-67P-201ENST00000459003 62 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 RNU2-11P-201ENST00000459191 187 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.4□□□□□ -2.47
CACNA1AO00555 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.4□□□□□ -2.47
CACNA1AO00555 MTND1P5-201ENST00000517906 940 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 AL157687.1-201ENST00000554853 619 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 AC090616.2-202ENST00000584248 222 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 AC022306.3-201ENST00000619930 550 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 AC099786.3-201ENST00000565735 1410 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
CACNA1AO00555 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 RNU6-715P-201ENST00000365204 103 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 MTATP6P17-201ENST00000431030 672 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.4□□□□□ -2.47
CACNA1AO00555 snoU13.16-201ENST00000459350 104 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 RNA5SP47-201ENST00000517230 109 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 RNU7-181P-201ENST00000517234 74 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 AC069113.1-201ENST00000517763 267 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 AP003168.1-201ENST00000530091 307 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 AC104072.1-201ENST00000568817 668 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 AC005609.4-201ENST00000625071 447 ntBASIC-0.4□□□□□ -2.47
CACNA1AO00555 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.41□□□□□ -2.47
CACNA1AO00555 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.41□□□□□ -2.47
CACNA1AO00555 SNORD14E-201ENST00000364009 85 ntBASIC-0.41□□□□□ -2.47
CACNA1AO00555 SNORD87-201ENST00000364849 89 ntBASIC-0.41□□□□□ -2.47
CACNA1AO00555 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.41□□□□□ -2.47
CACNA1AO00555 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.41□□□□□ -2.47
CACNA1AO00555 RNU6-455P-201ENST00000384681 107 ntBASIC-0.41□□□□□ -2.47
CACNA1AO00555 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.41□□□□□ -2.47
CACNA1AO00555 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.41□□□□□ -2.47
CACNA1AO00555 MIR876-201ENST00000401147 81 ntBASIC-0.41□□□□□ -2.47
CACNA1AO00555 MRPL42P2-201ENST00000403169 426 ntBASIC-0.41□□□□□ -2.47
CACNA1AO00555 MIR320B2-201ENST00000408479 138 ntBASIC-0.41□□□□□ -2.47
CACNA1AO00555 GMFBP1-201ENST00000467831 427 ntBASIC-0.41□□□□□ -2.47
CACNA1AO00555 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.41□□□□□ -2.47
CACNA1AO00555 AC010598.1-201ENST00000510378 103 ntBASIC-0.41□□□□□ -2.47
CACNA1AO00555 RNU6-107P-201ENST00000516643 102 ntBASIC-0.41□□□□□ -2.47
CACNA1AO00555 RNU6-881P-201ENST00000516813 102 ntBASIC-0.41□□□□□ -2.47
CACNA1AO00555 RNU6-334P-201ENST00000517072 102 ntBASIC-0.41□□□□□ -2.47
CACNA1AO00555 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.41□□□□□ -2.47
CACNA1AO00555 AP000676.1-201ENST00000533307 52 ntBASIC-0.41□□□□□ -2.47
CACNA1AO00555 AL136370.1-201ENST00000608166 691 ntBASIC-0.41□□□□□ -2.47
CACNA1AO00555 SNORA70.25-201ENST00000612741 95 ntBASIC-0.41□□□□□ -2.47
CACNA1AO00555 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.41□□□□□ -2.47
CACNA1AO00555 MTND1P7-201ENST00000632801 297 ntBASIC-0.41□□□□□ -2.47
CACNA1AO00555 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.41□□□□□ -2.48
CACNA1AO00555 RNU6-641P-201ENST00000384006 107 ntBASIC-0.41□□□□□ -2.48
CACNA1AO00555 SNORA75.4-201ENST00000391278 119 ntBASIC-0.41□□□□□ -2.48
CACNA1AO00555 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.41□□□□□ -2.48
CACNA1AO00555 AC112204.1-201ENST00000502591 103 ntBASIC-0.41□□□□□ -2.48
CACNA1AO00555 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.41□□□□□ -2.48
CACNA1AO00555 SNORA25.17-201ENST00000517184 124 ntBASIC-0.41□□□□□ -2.48
CACNA1AO00555 AL158050.2-201ENST00000605336 568 ntBASIC-0.41□□□□□ -2.48
CACNA1AO00555 U6.114-201ENST00000636407 96 ntBASIC-0.41□□□□□ -2.48
CACNA1AO00555 Z97988.1-201ENST00000637697 135 ntBASIC-0.41□□□□□ -2.48
CACNA1AO00555 RNU6-428P-201ENST00000362942 107 ntBASIC-0.42□□□□□ -2.48
CACNA1AO00555 RNU6-324P-201ENST00000363957 106 ntBASIC-0.42□□□□□ -2.48
CACNA1AO00555 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.42□□□□□ -2.48
CACNA1AO00555 RNU6-136P-201ENST00000384663 107 ntBASIC-0.42□□□□□ -2.48
CACNA1AO00555 SNORD38B-201ENST00000384690 67 ntBASIC-0.42□□□□□ -2.48
CACNA1AO00555 AL008987.1-201ENST00000415528 237 ntBASIC-0.42□□□□□ -2.48
CACNA1AO00555 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-0.42□□□□□ -2.48
CACNA1AO00555 AC236972.2-201ENST00000434979 310 ntBASIC-0.42□□□□□ -2.48
CACNA1AO00555 RPL22P17-201ENST00000438729 315 ntBASIC-0.42□□□□□ -2.48
CACNA1AO00555 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.42□□□□□ -2.48
CACNA1AO00555 MTND1P12-201ENST00000455231 147 ntBASIC-0.42□□□□□ -2.48
CACNA1AO00555 AC091133.4-201ENST00000511142 308 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms