Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AL513534.2-201ENST00000603836 250 ntBASIC1.26□□□□□ -2.21
RTCAO00442 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.26□□□□□ -2.21
RTCAO00442 AL512598.1-201ENST00000610158 273 ntBASIC1.26□□□□□ -2.21
RTCAO00442 AC242852.1-201ENST00000612151 96 ntBASIC1.26□□□□□ -2.21
RTCAO00442 AC244015.1-201ENST00000622301 99 ntBASIC1.26□□□□□ -2.21
RTCAO00442 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
RTCAO00442 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
RTCAO00442 Y_RNA.19-201ENST00000362462 99 ntBASIC1.25□□□□□ -2.21
RTCAO00442 RNU6-199P-201ENST00000362954 107 ntBASIC1.25□□□□□ -2.21
RTCAO00442 RNU4-80P-201ENST00000363200 141 ntBASIC1.25□□□□□ -2.21
RTCAO00442 Y_RNA.210-201ENST00000364161 110 ntBASIC1.25□□□□□ -2.21
RTCAO00442 RNU6-1080P-201ENST00000383982 107 ntBASIC1.25□□□□□ -2.21
RTCAO00442 SNORA72.4-201ENST00000384174 132 ntBASIC1.25□□□□□ -2.21
RTCAO00442 Y_RNA.569-201ENST00000384749 103 ntBASIC1.25□□□□□ -2.21
RTCAO00442 BTF3P4-201ENST00000418852 495 ntBASIC1.25□□□□□ -2.21
RTCAO00442 AC004223.1-201ENST00000479840 271 ntBASIC1.25□□□□□ -2.21
RTCAO00442 CYCTP-201ENST00000504253 315 ntBASIC1.25□□□□□ -2.21
RTCAO00442 AP003072.1-201ENST00000531740 145 ntBASIC1.25□□□□□ -2.21
RTCAO00442 MIR4421-201ENST00000578133 69 ntBASIC1.25□□□□□ -2.21
RTCAO00442 MIR4769-201ENST00000584126 77 ntBASIC1.25□□□□□ -2.21
RTCAO00442 Y_RNA.812-201ENST00000610788 101 ntBASIC1.25□□□□□ -2.21
RTCAO00442 Y_RNA.784-201ENST00000613803 101 ntBASIC1.25□□□□□ -2.21
RTCAO00442 MIR7974-201ENST00000615835 79 ntBASIC1.25□□□□□ -2.21
RTCAO00442 Y_RNA.787-201ENST00000616522 101 ntBASIC1.25□□□□□ -2.21
RTCAO00442 AL591926.4-201ENST00000616895 298 ntBASIC1.25□□□□□ -2.21
RTCAO00442 Y_RNA.780-201ENST00000617336 101 ntBASIC1.25□□□□□ -2.21
RTCAO00442 Y_RNA.801-201ENST00000619005 101 ntBASIC1.25□□□□□ -2.21
RTCAO00442 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
RTCAO00442 RNU6-674P-201ENST00000363831 107 ntBASIC1.24□□□□□ -2.21
RTCAO00442 RNU6-801P-201ENST00000364087 105 ntBASIC1.24□□□□□ -2.21
RTCAO00442 Y_RNA.253-201ENST00000364562 112 ntBASIC1.24□□□□□ -2.21
RTCAO00442 SNORA25-201ENST00000384384 134 ntBASIC1.24□□□□□ -2.21
RTCAO00442 RNU6-1160P-201ENST00000384546 104 ntBASIC1.24□□□□□ -2.21
RTCAO00442 RNU6-1011P-201ENST00000384668 107 ntBASIC1.24□□□□□ -2.21
RTCAO00442 MIR758-201ENST00000390227 88 ntBASIC1.24□□□□□ -2.21
RTCAO00442 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
RTCAO00442 RNU6-482P-201ENST00000391068 107 ntBASIC1.24□□□□□ -2.21
RTCAO00442 MRPS35P2-201ENST00000508242 191 ntBASIC1.24□□□□□ -2.21
RTCAO00442 SUMO2P16-201ENST00000519475 264 ntBASIC1.24□□□□□ -2.21
RTCAO00442 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.24□□□□□ -2.21
RTCAO00442 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
RTCAO00442 MIR3145-201ENST00000580727 82 ntBASIC1.24□□□□□ -2.21
RTCAO00442 MIR4719-201ENST00000585233 84 ntBASIC1.24□□□□□ -2.21
RTCAO00442 AC006504.6-201ENST00000590142 199 ntBASIC1.24□□□□□ -2.21
RTCAO00442 MIR548AY-201ENST00000617669 107 ntBASIC1.24□□□□□ -2.21
RTCAO00442 AC012676.2-201ENST00000619258 186 ntBASIC1.24□□□□□ -2.21
RTCAO00442 AC068647.2-201ENST00000637380 353 ntBASIC1.24□□□□□ -2.21
RTCAO00442 AL442644.1-201ENST00000454390 3105 ntBASIC1.24□□□□□ -2.21
RTCAO00442 U8.7-201ENST00000364940 136 ntBASIC1.23□□□□□ -2.21
RTCAO00442 SNORA2.2-201ENST00000365473 135 ntBASIC1.23□□□□□ -2.21
RTCAO00442 Y_RNA.518-201ENST00000384552 113 ntBASIC1.23□□□□□ -2.21
RTCAO00442 MIR522-201ENST00000385071 87 ntBASIC1.23□□□□□ -2.21
RTCAO00442 RNU6-1109P-201ENST00000391187 107 ntBASIC1.23□□□□□ -2.21
RTCAO00442 Y_RNA.602-201ENST00000410535 92 ntBASIC1.23□□□□□ -2.21
RTCAO00442 MTCO1P5-201ENST00000433573 344 ntBASIC1.23□□□□□ -2.21
RTCAO00442 HMGN1P7-201ENST00000491722 313 ntBASIC1.23□□□□□ -2.21
RTCAO00442 AL133373.1-201ENST00000497098 94 ntBASIC1.23□□□□□ -2.21
RTCAO00442 AP003733.2-201ENST00000529409 171 ntBASIC1.23□□□□□ -2.21
RTCAO00442 AC024405.2-202ENST00000532731 184 ntBASIC1.23□□□□□ -2.21
RTCAO00442 AC090049.2-201ENST00000550377 109 ntBASIC1.23□□□□□ -2.21
RTCAO00442 AC087685.1-201ENST00000587507 141 ntBASIC1.23□□□□□ -2.21
RTCAO00442 POLR3GP1-201ENST00000594073 261 ntBASIC1.23□□□□□ -2.21
RTCAO00442 AP000942.3-201ENST00000603702 160 ntBASIC1.23□□□□□ -2.21
RTCAO00442 AC027335.2-201ENST00000624030 375 ntBASIC1.23□□□□□ -2.21
RTCAO00442 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
RTCAO00442 SNORA63-201ENST00000363450 132 ntBASIC1.22□□□□□ -2.21
RTCAO00442 SNORA7.1-201ENST00000363750 139 ntBASIC1.22□□□□□ -2.21
RTCAO00442 Y_RNA.541-201ENST00000384640 113 ntBASIC1.22□□□□□ -2.21
RTCAO00442 MIR891A-201ENST00000401237 79 ntBASIC1.22□□□□□ -2.21
RTCAO00442 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.22□□□□□ -2.21
RTCAO00442 AP1B1P2-201ENST00000416196 106 ntBASIC1.22□□□□□ -2.21
RTCAO00442 RNY3P15-201ENST00000516297 97 ntBASIC1.22□□□□□ -2.21
RTCAO00442 RNU2-31P-201ENST00000516954 155 ntBASIC1.22□□□□□ -2.21
RTCAO00442 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.22□□□□□ -2.21
RTCAO00442 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.22□□□□□ -2.21
RTCAO00442 AC120024.3-201ENST00000603167 156 ntBASIC1.22□□□□□ -2.21
RTCAO00442 BX284668.6-201ENST00000606899 438 ntBASIC1.22□□□□□ -2.21
RTCAO00442 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.21□□□□□ -2.22
RTCAO00442 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RTCAO00442 RNU6-694P-201ENST00000364071 147 ntBASIC1.21□□□□□ -2.22
RTCAO00442 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
RTCAO00442 SNORA53-201ENST00000391141 249 ntBASIC1.21□□□□□ -2.22
RTCAO00442 SNORA40.6-201ENST00000391153 128 ntBASIC1.21□□□□□ -2.22
RTCAO00442 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.21□□□□□ -2.22
RTCAO00442 RPL21P38-201ENST00000418090 167 ntBASIC1.21□□□□□ -2.22
RTCAO00442 AC009474.2-201ENST00000451383 136 ntBASIC1.21□□□□□ -2.22
RTCAO00442 OR2A41P-201ENST00000473586 105 ntBASIC1.21□□□□□ -2.22
RTCAO00442 AC092991.1-201ENST00000477176 376 ntBASIC1.21□□□□□ -2.22
RTCAO00442 AC098869.1-201ENST00000481627 292 ntBASIC1.21□□□□□ -2.22
RTCAO00442 RNU7-12P-201ENST00000516030 62 ntBASIC1.21□□□□□ -2.22
RTCAO00442 AL022345.2-201ENST00000606307 135 ntBASIC1.21□□□□□ -2.22
RTCAO00442 AC022140.2-201ENST00000623500 188 ntBASIC1.21□□□□□ -2.22
RTCAO00442 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RTCAO00442 AL391516.1-201ENST00000554380 2449 ntBASIC1.21□□□□□ -2.22
RTCAO00442 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
RTCAO00442 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.21□□□□□ -2.22
RTCAO00442 UBE2WP1-201ENST00000362030 340 ntBASIC1.2□□□□□ -2.22
RTCAO00442 MIR378A-201ENST00000362177 66 ntBASIC1.2□□□□□ -2.22
RTCAO00442 Y_RNA.84-201ENST00000363011 104 ntBASIC1.2□□□□□ -2.22
RTCAO00442 Y_RNA.145-201ENST00000363527 102 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms