Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 RNU6-1116P-201ENST00000517269 99 ntBASIC1.54□□□□□ -2.16
EIF3FO00303 CYP3A52P-201ENST00000563326 91 ntBASIC1.54□□□□□ -2.16
EIF3FO00303 AC087685.1-201ENST00000587507 141 ntBASIC1.54□□□□□ -2.16
EIF3FO00303 MIR8081-201ENST00000611533 95 ntBASIC1.54□□□□□ -2.16
EIF3FO00303 JPX_2.1-201ENST00000614161 69 ntBASIC1.54□□□□□ -2.16
EIF3FO00303 MIR8065-201ENST00000620577 100 ntBASIC1.54□□□□□ -2.16
EIF3FO00303 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
EIF3FO00303 RNU6-801P-201ENST00000364087 105 ntBASIC1.53□□□□□ -2.16
EIF3FO00303 snoU2-30.1-201ENST00000365012 70 ntBASIC1.53□□□□□ -2.16
EIF3FO00303 RNU6-514P-201ENST00000384208 107 ntBASIC1.53□□□□□ -2.16
EIF3FO00303 MIR517C-201ENST00000385103 95 ntBASIC1.53□□□□□ -2.16
EIF3FO00303 SNORA67.5-201ENST00000391036 107 ntBASIC1.53□□□□□ -2.16
EIF3FO00303 MLLT10P1-201ENST00000418346 262 ntBASIC1.53□□□□□ -2.16
EIF3FO00303 AP003733.2-201ENST00000529409 171 ntBASIC1.53□□□□□ -2.16
EIF3FO00303 AL512605.2-201ENST00000592972 256 ntBASIC1.53□□□□□ -2.16
EIF3FO00303 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
EIF3FO00303 SNORA25.1-201ENST00000362326 128 ntBASIC1.52□□□□□ -2.17
EIF3FO00303 RNU6-1084P-201ENST00000362498 107 ntBASIC1.52□□□□□ -2.17
EIF3FO00303 snoU2_19.2-201ENST00000363024 80 ntBASIC1.52□□□□□ -2.17
EIF3FO00303 RNU6-674P-201ENST00000363831 107 ntBASIC1.52□□□□□ -2.17
EIF3FO00303 RNU6-899P-201ENST00000363947 107 ntBASIC1.52□□□□□ -2.17
EIF3FO00303 RNA5SP99-201ENST00000364020 114 ntBASIC1.52□□□□□ -2.17
EIF3FO00303 RNU6-969P-201ENST00000383900 105 ntBASIC1.52□□□□□ -2.17
EIF3FO00303 SNORA36B-201ENST00000410438 131 ntBASIC1.52□□□□□ -2.17
EIF3FO00303 RNU6-437P-201ENST00000459408 95 ntBASIC1.52□□□□□ -2.17
EIF3FO00303 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.52□□□□□ -2.17
EIF3FO00303 AP003072.1-201ENST00000531740 145 ntBASIC1.52□□□□□ -2.17
EIF3FO00303 AC006504.6-201ENST00000590142 199 ntBASIC1.52□□□□□ -2.17
EIF3FO00303 SNORA63-201ENST00000363450 132 ntBASIC1.51□□□□□ -2.17
EIF3FO00303 Y_RNA.541-201ENST00000384640 113 ntBASIC1.51□□□□□ -2.17
EIF3FO00303 SNORD41-201ENST00000386967 70 ntBASIC1.51□□□□□ -2.17
EIF3FO00303 RNU6-955P-201ENST00000410497 104 ntBASIC1.51□□□□□ -2.17
EIF3FO00303 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.51□□□□□ -2.17
EIF3FO00303 SNORD45.4-201ENST00000516629 73 ntBASIC1.51□□□□□ -2.17
EIF3FO00303 AL160236.1-201ENST00000556317 195 ntBASIC1.51□□□□□ -2.17
EIF3FO00303 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.51□□□□□ -2.17
EIF3FO00303 MIR15B-201ENST00000385045 98 ntBASIC1.5□□□□□ -2.17
EIF3FO00303 SNORA26.5-201ENST00000391215 123 ntBASIC1.5□□□□□ -2.17
EIF3FO00303 RPL21P38-201ENST00000418090 167 ntBASIC1.5□□□□□ -2.17
EIF3FO00303 AL603825.1-201ENST00000438481 80 ntBASIC1.5□□□□□ -2.17
EIF3FO00303 AC098869.1-201ENST00000481627 292 ntBASIC1.5□□□□□ -2.17
EIF3FO00303 RNU6-1007P-201ENST00000516586 107 ntBASIC1.5□□□□□ -2.17
EIF3FO00303 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
EIF3FO00303 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.5□□□□□ -2.17
EIF3FO00303 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
EIF3FO00303 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
EIF3FO00303 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
EIF3FO00303 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
EIF3FO00303 Y_RNA.64-201ENST00000362845 102 ntBASIC1.49□□□□□ -2.17
EIF3FO00303 RNU6-806P-201ENST00000365147 105 ntBASIC1.49□□□□□ -2.17
EIF3FO00303 Y_RNA.336-201ENST00000365307 109 ntBASIC1.49□□□□□ -2.17
EIF3FO00303 RNU6-144P-201ENST00000383951 107 ntBASIC1.49□□□□□ -2.17
EIF3FO00303 RNU2-14P-201ENST00000411053 191 ntBASIC1.49□□□□□ -2.17
EIF3FO00303 SNORD13-201ENST00000459299 104 ntBASIC1.49□□□□□ -2.17
EIF3FO00303 RNU6-165P-201ENST00000517170 99 ntBASIC1.49□□□□□ -2.17
EIF3FO00303 SNORD53B-201ENST00000577887 78 ntBASIC1.49□□□□□ -2.17
EIF3FO00303 FAM106DP-201ENST00000586416 501 ntBASIC1.49□□□□□ -2.17
EIF3FO00303 AC005357.1-201ENST00000588399 301 ntBASIC1.49□□□□□ -2.17
EIF3FO00303 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.49□□□□□ -2.17
EIF3FO00303 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
EIF3FO00303 RNU6-1048P-201ENST00000364054 107 ntBASIC1.48□□□□□ -2.17
EIF3FO00303 Y_RNA.242-201ENST00000364473 110 ntBASIC1.48□□□□□ -2.17
EIF3FO00303 Y_RNA.326-201ENST00000365176 113 ntBASIC1.48□□□□□ -2.17
EIF3FO00303 MIR215-201ENST00000384858 110 ntBASIC1.48□□□□□ -2.17
EIF3FO00303 MIR526A1-201ENST00000384897 85 ntBASIC1.48□□□□□ -2.17
EIF3FO00303 MIR1298-201ENST00000408783 112 ntBASIC1.48□□□□□ -2.17
EIF3FO00303 AC113618.1-201ENST00000416747 285 ntBASIC1.48□□□□□ -2.17
EIF3FO00303 DYNLT3P2-201ENST00000442517 295 ntBASIC1.48□□□□□ -2.17
EIF3FO00303 RPL39P39-201ENST00000455840 151 ntBASIC1.48□□□□□ -2.17
EIF3FO00303 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.48□□□□□ -2.17
EIF3FO00303 AP000942.3-201ENST00000603702 160 ntBASIC1.48□□□□□ -2.17
EIF3FO00303 MIR7974-201ENST00000615835 79 ntBASIC1.48□□□□□ -2.17
EIF3FO00303 Y_RNA.84-201ENST00000363011 104 ntBASIC1.47□□□□□ -2.17
EIF3FO00303 RNU6-1209P-201ENST00000363655 107 ntBASIC1.47□□□□□ -2.17
EIF3FO00303 SNORD14E-201ENST00000364009 85 ntBASIC1.47□□□□□ -2.17
EIF3FO00303 Y_RNA.796-201ENST00000364268 102 ntBASIC1.47□□□□□ -2.17
EIF3FO00303 Y_RNA.799-201ENST00000364992 102 ntBASIC1.47□□□□□ -2.17
EIF3FO00303 RNU6-1011P-201ENST00000384668 107 ntBASIC1.47□□□□□ -2.17
EIF3FO00303 MIR136-201ENST00000385207 82 ntBASIC1.47□□□□□ -2.17
EIF3FO00303 MIR320A-201ENST00000385302 82 ntBASIC1.47□□□□□ -2.17
EIF3FO00303 RNU6-763P-201ENST00000390865 106 ntBASIC1.47□□□□□ -2.17
EIF3FO00303 MTCO2P33-201ENST00000402100 465 ntBASIC1.47□□□□□ -2.17
EIF3FO00303 AC091959.1-201ENST00000495857 238 ntBASIC1.47□□□□□ -2.17
EIF3FO00303 SNORA31.24-201ENST00000517232 57 ntBASIC1.47□□□□□ -2.17
EIF3FO00303 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.47□□□□□ -2.17
EIF3FO00303 Y_RNA.812-201ENST00000610788 101 ntBASIC1.47□□□□□ -2.17
EIF3FO00303 Y_RNA.784-201ENST00000613803 101 ntBASIC1.47□□□□□ -2.17
EIF3FO00303 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
EIF3FO00303 Y_RNA.787-201ENST00000616522 101 ntBASIC1.47□□□□□ -2.17
EIF3FO00303 Y_RNA.780-201ENST00000617336 101 ntBASIC1.47□□□□□ -2.17
EIF3FO00303 Y_RNA.801-201ENST00000619005 101 ntBASIC1.47□□□□□ -2.17
EIF3FO00303 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
EIF3FO00303 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
EIF3FO00303 Y_RNA.26-201ENST00000362539 101 ntBASIC1.46□□□□□ -2.18
EIF3FO00303 RNU6-1272P-201ENST00000362776 107 ntBASIC1.46□□□□□ -2.18
EIF3FO00303 RNU6-1205P-201ENST00000363625 106 ntBASIC1.46□□□□□ -2.18
EIF3FO00303 SNORD50B-201ENST00000364995 70 ntBASIC1.46□□□□□ -2.18
EIF3FO00303 RNU6-1160P-201ENST00000384546 104 ntBASIC1.46□□□□□ -2.18
EIF3FO00303 RNU6-713P-201ENST00000384761 107 ntBASIC1.46□□□□□ -2.18
EIF3FO00303 SNORA67.6-201ENST00000391093 99 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 259.9 ms