Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL590004.1-201ENST00000405321 300 ntBASIC0.96□□□□□ -2.26
PDLIM1O00151 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.96□□□□□ -2.26
PDLIM1O00151 UBL5P1-201ENST00000507979 193 ntBASIC0.96□□□□□ -2.26
PDLIM1O00151 SNORD45.4-201ENST00000516629 73 ntBASIC0.96□□□□□ -2.26
PDLIM1O00151 RNU7-116P-201ENST00000516940 62 ntBASIC0.96□□□□□ -2.26
PDLIM1O00151 MIR3145-201ENST00000580727 82 ntBASIC0.96□□□□□ -2.26
PDLIM1O00151 AC091895.1-201ENST00000624494 256 ntBASIC0.96□□□□□ -2.26
PDLIM1O00151 AL008636.1-201ENST00000625038 1018 ntBASIC0.96□□□□□ -2.26
PDLIM1O00151 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
PDLIM1O00151 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
PDLIM1O00151 MIR337-201ENST00000362281 93 ntBASIC0.95□□□□□ -2.26
PDLIM1O00151 Y_RNA.112-201ENST00000363250 102 ntBASIC0.95□□□□□ -2.26
PDLIM1O00151 Y_RNA.813-201ENST00000364639 102 ntBASIC0.95□□□□□ -2.26
PDLIM1O00151 Y_RNA.310-201ENST00000365063 113 ntBASIC0.95□□□□□ -2.26
PDLIM1O00151 Y_RNA.368-201ENST00000365547 113 ntBASIC0.95□□□□□ -2.26
PDLIM1O00151 RNU6-1323P-201ENST00000384025 107 ntBASIC0.95□□□□□ -2.26
PDLIM1O00151 MIR516B2-201ENST00000385190 85 ntBASIC0.95□□□□□ -2.26
PDLIM1O00151 MIR1302-11-201ENST00000408051 138 ntBASIC0.95□□□□□ -2.26
PDLIM1O00151 MIR1302-9-201ENST00000408365 138 ntBASIC0.95□□□□□ -2.26
PDLIM1O00151 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.95□□□□□ -2.26
PDLIM1O00151 MIR1302-10-201ENST00000408734 138 ntBASIC0.95□□□□□ -2.26
PDLIM1O00151 SNRPGP10-201ENST00000432323 225 ntBASIC0.95□□□□□ -2.26
PDLIM1O00151 AC087343.1-201ENST00000477341 475 ntBASIC0.95□□□□□ -2.26
PDLIM1O00151 AC117454.1-201ENST00000491120 168 ntBASIC0.95□□□□□ -2.26
PDLIM1O00151 RPL23AP54-201ENST00000495129 419 ntBASIC0.95□□□□□ -2.26
PDLIM1O00151 MIR1302-2-201ENST00000607096 138 ntBASIC0.95□□□□□ -2.26
PDLIM1O00151 AC090971.5-201ENST00000621102 293 ntBASIC0.95□□□□□ -2.26
PDLIM1O00151 AC027335.2-201ENST00000624030 375 ntBASIC0.95□□□□□ -2.26
PDLIM1O00151 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.95□□□□□ -2.26
PDLIM1O00151 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
PDLIM1O00151 Y_RNA.336-201ENST00000365307 109 ntBASIC0.94□□□□□ -2.26
PDLIM1O00151 MIR136-201ENST00000385207 82 ntBASIC0.94□□□□□ -2.26
PDLIM1O00151 RNU6-308P-201ENST00000390957 107 ntBASIC0.94□□□□□ -2.26
PDLIM1O00151 SEPT14P8-201ENST00000508026 178 ntBASIC0.94□□□□□ -2.26
PDLIM1O00151 RNU6-475P-201ENST00000516073 104 ntBASIC0.94□□□□□ -2.26
PDLIM1O00151 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
PDLIM1O00151 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
PDLIM1O00151 RNU1-124P-201ENST00000363861 145 ntBASIC0.93□□□□□ -2.26
PDLIM1O00151 Y_RNA.383-201ENST00000383855 97 ntBASIC0.93□□□□□ -2.26
PDLIM1O00151 POLR2KP2-201ENST00000438155 177 ntBASIC0.93□□□□□ -2.26
PDLIM1O00151 COX6CP14-201ENST00000469580 174 ntBASIC0.93□□□□□ -2.26
PDLIM1O00151 SNORD111.1-201ENST00000516421 86 ntBASIC0.93□□□□□ -2.26
PDLIM1O00151 AC024405.2-202ENST00000532731 184 ntBASIC0.93□□□□□ -2.26
PDLIM1O00151 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.93□□□□□ -2.26
PDLIM1O00151 MIR4661-201ENST00000582720 75 ntBASIC0.93□□□□□ -2.26
PDLIM1O00151 AC124312.5-201ENST00000604451 268 ntBASIC0.93□□□□□ -2.26
PDLIM1O00151 SNORD113-5-201ENST00000607261 78 ntBASIC0.93□□□□□ -2.26
PDLIM1O00151 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.93□□□□□ -2.26
PDLIM1O00151 JPX_2.1-201ENST00000614161 69 ntBASIC0.93□□□□□ -2.26
PDLIM1O00151 U8.7-201ENST00000364940 136 ntBASIC0.92□□□□□ -2.26
PDLIM1O00151 SNORD50B-201ENST00000364995 70 ntBASIC0.92□□□□□ -2.26
PDLIM1O00151 Y_RNA.395-201ENST00000383945 109 ntBASIC0.92□□□□□ -2.26
PDLIM1O00151 Y_RNA.445-201ENST00000384168 102 ntBASIC0.92□□□□□ -2.26
PDLIM1O00151 SNORA80D-201ENST00000384488 135 ntBASIC0.92□□□□□ -2.26
PDLIM1O00151 HMGN2P32-201ENST00000444648 269 ntBASIC0.92□□□□□ -2.26
PDLIM1O00151 MTND4P19-201ENST00000446659 478 ntBASIC0.92□□□□□ -2.26
PDLIM1O00151 HMGN1P10-201ENST00000474557 553 ntBASIC0.92□□□□□ -2.26
PDLIM1O00151 SNORD116-28-201ENST00000516123 91 ntBASIC0.92□□□□□ -2.26
PDLIM1O00151 AP003357.1-201ENST00000604497 148 ntBASIC0.92□□□□□ -2.26
PDLIM1O00151 AL096861.1-201ENST00000610899 123 ntBASIC0.92□□□□□ -2.26
PDLIM1O00151 PART1_1.1-201ENST00000611761 217 ntBASIC0.92□□□□□ -2.26
PDLIM1O00151 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.92□□□□□ -2.26
PDLIM1O00151 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
PDLIM1O00151 MIR8070-201ENST00000616510 88 ntBASIC0.92□□□□□ -2.26
PDLIM1O00151 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.91□□□□□ -2.26
PDLIM1O00151 Y_RNA.31-201ENST00000362574 102 ntBASIC0.91□□□□□ -2.26
PDLIM1O00151 Y_RNA.164-201ENST00000363709 102 ntBASIC0.91□□□□□ -2.26
PDLIM1O00151 Y_RNA.203-201ENST00000364106 102 ntBASIC0.91□□□□□ -2.26
PDLIM1O00151 MIR146A-201ENST00000385201 99 ntBASIC0.91□□□□□ -2.26
PDLIM1O00151 MIR802-201ENST00000390235 94 ntBASIC0.91□□□□□ -2.26
PDLIM1O00151 RNU6-1248P-201ENST00000391096 64 ntBASIC0.91□□□□□ -2.26
PDLIM1O00151 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.91□□□□□ -2.26
PDLIM1O00151 MIR1276-201ENST00000408707 83 ntBASIC0.91□□□□□ -2.26
PDLIM1O00151 RNU6-130P-201ENST00000411112 103 ntBASIC0.91□□□□□ -2.26
PDLIM1O00151 AC063976.4-201ENST00000421971 163 ntBASIC0.91□□□□□ -2.26
PDLIM1O00151 SNORD79.1-201ENST00000516069 84 ntBASIC0.91□□□□□ -2.26
PDLIM1O00151 RNU6-397P-201ENST00000516226 104 ntBASIC0.91□□□□□ -2.26
PDLIM1O00151 RNU7-115P-201ENST00000516433 55 ntBASIC0.91□□□□□ -2.26
PDLIM1O00151 RNU6-1046P-201ENST00000516538 107 ntBASIC0.91□□□□□ -2.26
PDLIM1O00151 RNA5SP102-201ENST00000516865 106 ntBASIC0.91□□□□□ -2.26
PDLIM1O00151 SNORA18.7-201ENST00000516910 131 ntBASIC0.91□□□□□ -2.26
PDLIM1O00151 AC090142.3-201ENST00000519012 385 ntBASIC0.91□□□□□ -2.26
PDLIM1O00151 MIR548AY-201ENST00000617669 107 ntBASIC0.91□□□□□ -2.26
PDLIM1O00151 SNORD14E-201ENST00000364009 85 ntBASIC0.9□□□□□ -2.27
PDLIM1O00151 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
PDLIM1O00151 Y_RNA.286-201ENST00000364813 102 ntBASIC0.9□□□□□ -2.27
PDLIM1O00151 Y_RNA.363-201ENST00000365529 113 ntBASIC0.9□□□□□ -2.27
PDLIM1O00151 SNORD42.2-201ENST00000365570 69 ntBASIC0.9□□□□□ -2.27
PDLIM1O00151 AC117470.1-201ENST00000381974 330 ntBASIC0.9□□□□□ -2.27
PDLIM1O00151 MIR520C-201ENST00000385005 87 ntBASIC0.9□□□□□ -2.27
PDLIM1O00151 SNORD12-201ENST00000391002 90 ntBASIC0.9□□□□□ -2.27
PDLIM1O00151 Y_RNA.602-201ENST00000410535 92 ntBASIC0.9□□□□□ -2.27
PDLIM1O00151 AC002429.1-201ENST00000437672 148 ntBASIC0.9□□□□□ -2.27
PDLIM1O00151 AC010655.3-201ENST00000478818 450 ntBASIC0.9□□□□□ -2.27
PDLIM1O00151 RPS23P4-201ENST00000487908 423 ntBASIC0.9□□□□□ -2.27
PDLIM1O00151 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.9□□□□□ -2.27
PDLIM1O00151 AC127455.1-201ENST00000565496 145 ntBASIC0.9□□□□□ -2.27
PDLIM1O00151 MIR3192-201ENST00000584920 77 ntBASIC0.9□□□□□ -2.27
PDLIM1O00151 AC007742.2-201ENST00000618226 398 ntBASIC0.9□□□□□ -2.27
PDLIM1O00151 AC090574.1-201ENST00000623186 233 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms