Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 POLR3GP1-201ENST00000594073 261 ntBASIC1.15□□□□□ -2.23
CCDC188H7C350 AL080274.1-201ENST00000605565 220 ntBASIC1.15□□□□□ -2.23
CCDC188H7C350 MIR6078-201ENST00000611069 100 ntBASIC1.15□□□□□ -2.23
CCDC188H7C350 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.15□□□□□ -2.23
CCDC188H7C350 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.15□□□□□ -2.23
CCDC188H7C350 MIR369-201ENST00000362155 70 ntBASIC1.14□□□□□ -2.23
CCDC188H7C350 U8.5-201ENST00000364528 136 ntBASIC1.14□□□□□ -2.23
CCDC188H7C350 Y_RNA.551-201ENST00000384661 102 ntBASIC1.14□□□□□ -2.23
CCDC188H7C350 AL590004.1-201ENST00000405321 300 ntBASIC1.14□□□□□ -2.23
CCDC188H7C350 AC245047.7-201ENST00000440265 293 ntBASIC1.14□□□□□ -2.23
CCDC188H7C350 HMGN2P32-201ENST00000444648 269 ntBASIC1.14□□□□□ -2.23
CCDC188H7C350 RPL23AP54-201ENST00000495129 419 ntBASIC1.14□□□□□ -2.23
CCDC188H7C350 AC136443.5-201ENST00000603741 370 ntBASIC1.14□□□□□ -2.23
CCDC188H7C350 AC103810.9-201ENST00000606688 112 ntBASIC1.14□□□□□ -2.23
CCDC188H7C350 AC091895.1-201ENST00000624494 256 ntBASIC1.14□□□□□ -2.23
CCDC188H7C350 AL008636.1-201ENST00000625038 1018 ntBASIC1.14□□□□□ -2.23
CCDC188H7C350 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CCDC188H7C350 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
CCDC188H7C350 Y_RNA.336-201ENST00000365307 109 ntBASIC1.13□□□□□ -2.23
CCDC188H7C350 Y_RNA.456-201ENST00000384232 111 ntBASIC1.13□□□□□ -2.23
CCDC188H7C350 MIR15B-201ENST00000385045 98 ntBASIC1.13□□□□□ -2.23
CCDC188H7C350 MIR1298-201ENST00000408783 112 ntBASIC1.13□□□□□ -2.23
CCDC188H7C350 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC188H7C350 RNA5SP404-201ENST00000517118 132 ntBASIC1.13□□□□□ -2.23
CCDC188H7C350 MIR4423-201ENST00000580922 80 ntBASIC1.13□□□□□ -2.23
CCDC188H7C350 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC188H7C350 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CCDC188H7C350 Y_RNA.813-201ENST00000364639 102 ntBASIC1.12□□□□□ -2.23
CCDC188H7C350 MIR7-2-201ENST00000384970 110 ntBASIC1.12□□□□□ -2.23
CCDC188H7C350 MIR136-201ENST00000385207 82 ntBASIC1.12□□□□□ -2.23
CCDC188H7C350 MIR613-201ENST00000385248 95 ntBASIC1.12□□□□□ -2.23
CCDC188H7C350 RNU6-308P-201ENST00000390957 107 ntBASIC1.12□□□□□ -2.23
CCDC188H7C350 MTATP6P23-201ENST00000440153 476 ntBASIC1.12□□□□□ -2.23
CCDC188H7C350 AC093852.1-201ENST00000503587 266 ntBASIC1.12□□□□□ -2.23
CCDC188H7C350 SNORD45.4-201ENST00000516629 73 ntBASIC1.12□□□□□ -2.23
CCDC188H7C350 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.12□□□□□ -2.23
CCDC188H7C350 RMST_2.1-201ENST00000617263 136 ntBASIC1.12□□□□□ -2.23
CCDC188H7C350 AC027335.2-201ENST00000624030 375 ntBASIC1.12□□□□□ -2.23
CCDC188H7C350 SNORD14E-201ENST00000364009 85 ntBASIC1.11□□□□□ -2.23
CCDC188H7C350 Y_RNA.419-201ENST00000384041 102 ntBASIC1.11□□□□□ -2.23
CCDC188H7C350 MIR522-201ENST00000385071 87 ntBASIC1.11□□□□□ -2.23
CCDC188H7C350 AC063976.4-201ENST00000421971 163 ntBASIC1.11□□□□□ -2.23
CCDC188H7C350 AC117454.1-201ENST00000491120 168 ntBASIC1.11□□□□□ -2.23
CCDC188H7C350 SNORA25.10-201ENST00000515926 124 ntBASIC1.11□□□□□ -2.23
CCDC188H7C350 RNU6-475P-201ENST00000516073 104 ntBASIC1.11□□□□□ -2.23
CCDC188H7C350 RNU6-397P-201ENST00000516226 104 ntBASIC1.11□□□□□ -2.23
CCDC188H7C350 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CCDC188H7C350 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CCDC188H7C350 AL078603.1-201ENST00000603824 313 ntBASIC1.11□□□□□ -2.23
CCDC188H7C350 AC124312.5-201ENST00000604451 268 ntBASIC1.11□□□□□ -2.23
CCDC188H7C350 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CCDC188H7C350 Y_RNA.368-201ENST00000365547 113 ntBASIC1.1□□□□□ -2.23
CCDC188H7C350 Y_RNA.383-201ENST00000383855 97 ntBASIC1.1□□□□□ -2.23
CCDC188H7C350 RNU6-1248P-201ENST00000391096 64 ntBASIC1.1□□□□□ -2.23
CCDC188H7C350 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.1□□□□□ -2.23
CCDC188H7C350 AC024405.2-202ENST00000532731 184 ntBASIC1.1□□□□□ -2.23
CCDC188H7C350 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.1□□□□□ -2.23
CCDC188H7C350 MIR4762-201ENST00000585261 75 ntBASIC1.1□□□□□ -2.23
CCDC188H7C350 SNORD113-5-201ENST00000607261 78 ntBASIC1.1□□□□□ -2.23
CCDC188H7C350 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CCDC188H7C350 MIR548AY-201ENST00000617669 107 ntBASIC1.1□□□□□ -2.23
CCDC188H7C350 uc_338.22-201ENST00000622722 187 ntBASIC1.1□□□□□ -2.23
CCDC188H7C350 Y_RNA.310-201ENST00000365063 113 ntBASIC1.09□□□□□ -2.23
CCDC188H7C350 SNORD114-22-201ENST00000365423 72 ntBASIC1.09□□□□□ -2.23
CCDC188H7C350 RNU6-1323P-201ENST00000384025 107 ntBASIC1.09□□□□□ -2.23
CCDC188H7C350 RNU6-1054P-201ENST00000411293 104 ntBASIC1.09□□□□□ -2.23
CCDC188H7C350 MRPL35P3-201ENST00000421557 364 ntBASIC1.09□□□□□ -2.23
CCDC188H7C350 SEPT14P8-201ENST00000508026 178 ntBASIC1.09□□□□□ -2.23
CCDC188H7C350 SNORA18.7-201ENST00000516910 131 ntBASIC1.09□□□□□ -2.23
CCDC188H7C350 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.09□□□□□ -2.23
CCDC188H7C350 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.09□□□□□ -2.23
CCDC188H7C350 MIR376A1-201ENST00000616574 68 ntBASIC1.09□□□□□ -2.23
CCDC188H7C350 AC007742.2-201ENST00000618226 398 ntBASIC1.09□□□□□ -2.23
CCDC188H7C350 Y_RNA.203-201ENST00000364106 102 ntBASIC1.08□□□□□ -2.24
CCDC188H7C350 SNORA70.7-201ENST00000384159 133 ntBASIC1.08□□□□□ -2.24
CCDC188H7C350 SNORD63-201ENST00000384262 68 ntBASIC1.08□□□□□ -2.24
CCDC188H7C350 SNORA80D-201ENST00000384488 135 ntBASIC1.08□□□□□ -2.24
CCDC188H7C350 MIR1302-11-201ENST00000408051 138 ntBASIC1.08□□□□□ -2.24
CCDC188H7C350 MIR1302-9-201ENST00000408365 138 ntBASIC1.08□□□□□ -2.24
CCDC188H7C350 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.08□□□□□ -2.24
CCDC188H7C350 MIR1302-10-201ENST00000408734 138 ntBASIC1.08□□□□□ -2.24
CCDC188H7C350 RNU6-101P-201ENST00000410323 104 ntBASIC1.08□□□□□ -2.24
CCDC188H7C350 Y_RNA.602-201ENST00000410535 92 ntBASIC1.08□□□□□ -2.24
CCDC188H7C350 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.08□□□□□ -2.24
CCDC188H7C350 MTND4P19-201ENST00000446659 478 ntBASIC1.08□□□□□ -2.24
CCDC188H7C350 MIR4295-201ENST00000585286 85 ntBASIC1.08□□□□□ -2.24
CCDC188H7C350 LARP7P1-201ENST00000605576 316 ntBASIC1.08□□□□□ -2.24
CCDC188H7C350 MIR1302-2-201ENST00000607096 138 ntBASIC1.08□□□□□ -2.24
CCDC188H7C350 AL096861.1-201ENST00000610899 123 ntBASIC1.08□□□□□ -2.24
CCDC188H7C350 AC090574.1-201ENST00000623186 233 ntBASIC1.08□□□□□ -2.24
CCDC188H7C350 SNORD81.1-201ENST00000363064 77 ntBASIC1.07□□□□□ -2.24
CCDC188H7C350 RNU4-80P-201ENST00000363200 141 ntBASIC1.07□□□□□ -2.24
CCDC188H7C350 RNY1-201ENST00000364228 113 ntBASIC1.07□□□□□ -2.24
CCDC188H7C350 RNU6-53P-201ENST00000365367 106 ntBASIC1.07□□□□□ -2.24
CCDC188H7C350 SNORA22-201ENST00000383907 134 ntBASIC1.07□□□□□ -2.24
CCDC188H7C350 Y_RNA.389-201ENST00000383924 113 ntBASIC1.07□□□□□ -2.24
CCDC188H7C350 SNORA22C-201ENST00000384614 134 ntBASIC1.07□□□□□ -2.24
CCDC188H7C350 MIR520C-201ENST00000385005 87 ntBASIC1.07□□□□□ -2.24
CCDC188H7C350 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.07□□□□□ -2.24
CCDC188H7C350 AP003357.1-201ENST00000604497 148 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms