Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AL117351.2-201ENST00000513571 157 ntBASIC0.96□□□□□ -2.26
NPIPA2E9PIF3 SNORA40.14-201ENST00000516543 86 ntBASIC0.96□□□□□ -2.26
NPIPA2E9PIF3 MIR3145-201ENST00000580727 82 ntBASIC0.96□□□□□ -2.26
NPIPA2E9PIF3 MIR4423-201ENST00000580922 80 ntBASIC0.96□□□□□ -2.26
NPIPA2E9PIF3 AL121655.1-201ENST00000605811 308 ntBASIC0.96□□□□□ -2.26
NPIPA2E9PIF3 AL096861.1-201ENST00000610899 123 ntBASIC0.96□□□□□ -2.26
NPIPA2E9PIF3 AC007485.1-201ENST00000616755 206 ntBASIC0.96□□□□□ -2.26
NPIPA2E9PIF3 AL391516.1-201ENST00000554380 2449 ntBASIC0.96□□□□□ -2.26
NPIPA2E9PIF3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
NPIPA2E9PIF3 Y_RNA.439-201ENST00000384119 94 ntBASIC0.95□□□□□ -2.26
NPIPA2E9PIF3 MIR19B1-201ENST00000384829 87 ntBASIC0.95□□□□□ -2.26
NPIPA2E9PIF3 MIR522-201ENST00000385071 87 ntBASIC0.95□□□□□ -2.26
NPIPA2E9PIF3 RPS29P1-201ENST00000465274 159 ntBASIC0.95□□□□□ -2.26
NPIPA2E9PIF3 SNORD45.4-201ENST00000516629 73 ntBASIC0.95□□□□□ -2.26
NPIPA2E9PIF3 AC022616.4-201ENST00000522985 181 ntBASIC0.95□□□□□ -2.26
NPIPA2E9PIF3 SNORD114-21-201ENST00000606412 72 ntBASIC0.95□□□□□ -2.26
NPIPA2E9PIF3 AL138825.1-201ENST00000618587 192 ntBASIC0.95□□□□□ -2.26
NPIPA2E9PIF3 U8.5-201ENST00000364528 136 ntBASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 Y_RNA.310-201ENST00000365063 113 ntBASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 Y_RNA.336-201ENST00000365307 109 ntBASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 Y_RNA.419-201ENST00000384041 102 ntBASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 Y_RNA.462-201ENST00000384268 102 ntBASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 Y_RNA.471-201ENST00000384312 102 ntBASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 SNORA72-201ENST00000384339 132 ntBASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 MIR452-201ENST00000385020 85 ntBASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 RNU6-710P-201ENST00000410424 105 ntBASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 U8.20-201ENST00000459445 131 ntBASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 AC010655.3-201ENST00000478818 450 ntBASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 UBL5P1-201ENST00000507979 193 ntBASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 RNU6-113P-201ENST00000516653 101 ntBASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 MIR4762-201ENST00000585261 75 ntBASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 POLR3GP1-201ENST00000594073 261 ntBASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 AL080274.1-201ENST00000605565 220 ntBASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 AL133255.1-201ENST00000606374 441 ntBASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 MIR6767-201ENST00000637302 66 ntBASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
NPIPA2E9PIF3 MIR369-201ENST00000362155 70 ntBASIC0.93□□□□□ -2.26
NPIPA2E9PIF3 Y_RNA.813-201ENST00000364639 102 ntBASIC0.93□□□□□ -2.26
NPIPA2E9PIF3 MIR489-201ENST00000384923 84 ntBASIC0.93□□□□□ -2.26
NPIPA2E9PIF3 RNU6-131P-201ENST00000391144 107 ntBASIC0.93□□□□□ -2.26
NPIPA2E9PIF3 AC063976.4-201ENST00000421971 163 ntBASIC0.93□□□□□ -2.26
NPIPA2E9PIF3 SNRPGP10-201ENST00000432323 225 ntBASIC0.93□□□□□ -2.26
NPIPA2E9PIF3 AC002429.1-201ENST00000437672 148 ntBASIC0.93□□□□□ -2.26
NPIPA2E9PIF3 AC117454.1-201ENST00000491120 168 ntBASIC0.93□□□□□ -2.26
NPIPA2E9PIF3 SNORD79.1-201ENST00000516069 84 ntBASIC0.93□□□□□ -2.26
NPIPA2E9PIF3 SNORD111.1-201ENST00000516421 86 ntBASIC0.93□□□□□ -2.26
NPIPA2E9PIF3 AC040926.1-201ENST00000530195 238 ntBASIC0.93□□□□□ -2.26
NPIPA2E9PIF3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.93□□□□□ -2.26
NPIPA2E9PIF3 MIR3192-201ENST00000584920 77 ntBASIC0.93□□□□□ -2.26
NPIPA2E9PIF3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.93□□□□□ -2.26
NPIPA2E9PIF3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.92□□□□□ -2.26
NPIPA2E9PIF3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
NPIPA2E9PIF3 SNORD50B-201ENST00000364995 70 ntBASIC0.92□□□□□ -2.26
NPIPA2E9PIF3 SNORD14.1-201ENST00000365609 90 ntBASIC0.92□□□□□ -2.26
NPIPA2E9PIF3 Y_RNA.551-201ENST00000384661 102 ntBASIC0.92□□□□□ -2.26
NPIPA2E9PIF3 RNU6-21P-201ENST00000384710 107 ntBASIC0.92□□□□□ -2.26
NPIPA2E9PIF3 MT-TD-201ENST00000387419 68 ntBASIC0.92□□□□□ -2.26
NPIPA2E9PIF3 RNU6-308P-201ENST00000390957 107 ntBASIC0.92□□□□□ -2.26
NPIPA2E9PIF3 snoU13.25-201ENST00000458945 104 ntBASIC0.92□□□□□ -2.26
NPIPA2E9PIF3 MIR4661-201ENST00000582720 75 ntBASIC0.92□□□□□ -2.26
NPIPA2E9PIF3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.92□□□□□ -2.26
NPIPA2E9PIF3 PART1_1.1-201ENST00000611761 217 ntBASIC0.92□□□□□ -2.26
NPIPA2E9PIF3 RMST_2.1-201ENST00000617263 136 ntBASIC0.92□□□□□ -2.26
NPIPA2E9PIF3 uc_338.22-201ENST00000622722 187 ntBASIC0.92□□□□□ -2.26
NPIPA2E9PIF3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
NPIPA2E9PIF3 U8.7-201ENST00000364940 136 ntBASIC0.91□□□□□ -2.26
NPIPA2E9PIF3 snoU2-30.1-201ENST00000365012 70 ntBASIC0.91□□□□□ -2.26
NPIPA2E9PIF3 Y_RNA.368-201ENST00000365547 113 ntBASIC0.91□□□□□ -2.26
NPIPA2E9PIF3 RNU6-1323P-201ENST00000384025 107 ntBASIC0.91□□□□□ -2.26
NPIPA2E9PIF3 MIR136-201ENST00000385207 82 ntBASIC0.91□□□□□ -2.26
NPIPA2E9PIF3 RNU6-130P-201ENST00000411112 103 ntBASIC0.91□□□□□ -2.26
NPIPA2E9PIF3 AC024067.1-201ENST00000426199 223 ntBASIC0.91□□□□□ -2.26
NPIPA2E9PIF3 MTATP6P23-201ENST00000440153 476 ntBASIC0.91□□□□□ -2.26
NPIPA2E9PIF3 RPS26P48-201ENST00000491713 339 ntBASIC0.91□□□□□ -2.26
NPIPA2E9PIF3 RPL23AP54-201ENST00000495129 419 ntBASIC0.91□□□□□ -2.26
NPIPA2E9PIF3 RNU6-1170P-201ENST00000515974 106 ntBASIC0.91□□□□□ -2.26
NPIPA2E9PIF3 SNORA18.7-201ENST00000516910 131 ntBASIC0.91□□□□□ -2.26
NPIPA2E9PIF3 AC090142.3-201ENST00000519012 385 ntBASIC0.91□□□□□ -2.26
NPIPA2E9PIF3 AC024405.2-202ENST00000532731 184 ntBASIC0.91□□□□□ -2.26
NPIPA2E9PIF3 AC103810.9-201ENST00000606688 112 ntBASIC0.91□□□□□ -2.26
NPIPA2E9PIF3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.91□□□□□ -2.26
NPIPA2E9PIF3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.91□□□□□ -2.26
NPIPA2E9PIF3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.91□□□□□ -2.26
NPIPA2E9PIF3 AC008163.1-202ENST00000636004 2889 ntBASIC0.9□□□□□ -2.26
NPIPA2E9PIF3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.9□□□□□ -2.27
NPIPA2E9PIF3 RNU4-50P-201ENST00000364361 141 ntBASIC0.9□□□□□ -2.27
NPIPA2E9PIF3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.9□□□□□ -2.27
NPIPA2E9PIF3 Y_RNA.286-201ENST00000364813 102 ntBASIC0.9□□□□□ -2.27
NPIPA2E9PIF3 Y_RNA.424-201ENST00000384063 103 ntBASIC0.9□□□□□ -2.27
NPIPA2E9PIF3 Y_RNA.456-201ENST00000384232 111 ntBASIC0.9□□□□□ -2.27
NPIPA2E9PIF3 SNORA80D-201ENST00000384488 135 ntBASIC0.9□□□□□ -2.27
NPIPA2E9PIF3 Y_RNA.526-201ENST00000384572 110 ntBASIC0.9□□□□□ -2.27
NPIPA2E9PIF3 SNORD124-201ENST00000459577 104 ntBASIC0.9□□□□□ -2.27
NPIPA2E9PIF3 RNU6-1046P-201ENST00000516538 107 ntBASIC0.9□□□□□ -2.27
NPIPA2E9PIF3 AC136932.1-201ENST00000574771 208 ntBASIC0.9□□□□□ -2.27
NPIPA2E9PIF3 Y_RNA.31-201ENST00000362574 102 ntBASIC0.89□□□□□ -2.27
NPIPA2E9PIF3 SNORA25.3-201ENST00000363205 127 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms