Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 RNU6-245P-201ENST00000384020 107 ntBASIC-2.56□□□□□ -2.82
LINC01549A6NIU2 MTND3P8-201ENST00000412909 339 ntBASIC-2.56□□□□□ -2.82
LINC01549A6NIU2 MTCO1P27-201ENST00000448269 226 ntBASIC-2.56□□□□□ -2.82
LINC01549A6NIU2 RNU6-437P-201ENST00000459408 95 ntBASIC-2.56□□□□□ -2.82
LINC01549A6NIU2 AC012414.2-201ENST00000559474 187 ntBASIC-2.56□□□□□ -2.82
LINC01549A6NIU2 AP002371.2-201ENST00000624450 503 ntBASIC-2.56□□□□□ -2.82
LINC01549A6NIU2 SNORA27.1-201ENST00000362604 124 ntBASIC-2.57□□□□□ -2.82
LINC01549A6NIU2 Y_RNA.136-201ENST00000363444 102 ntBASIC-2.57□□□□□ -2.82
LINC01549A6NIU2 SNORA63.5-201ENST00000363548 123 ntBASIC-2.57□□□□□ -2.82
LINC01549A6NIU2 Y_RNA.410-201ENST00000383992 113 ntBASIC-2.57□□□□□ -2.82
LINC01549A6NIU2 SNORA72.6-201ENST00000384520 129 ntBASIC-2.57□□□□□ -2.82
LINC01549A6NIU2 SNX3P1X-201ENST00000414887 175 ntBASIC-2.57□□□□□ -2.82
LINC01549A6NIU2 USMG5P1-201ENST00000425964 177 ntBASIC-2.57□□□□□ -2.82
LINC01549A6NIU2 AL031667.1-201ENST00000440222 725 ntBASIC-2.57□□□□□ -2.82
LINC01549A6NIU2 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-2.57□□□□□ -2.82
LINC01549A6NIU2 RNA5SP180-201ENST00000516181 101 ntBASIC-2.57□□□□□ -2.82
LINC01549A6NIU2 SNORA40.17-201ENST00000517256 115 ntBASIC-2.57□□□□□ -2.82
LINC01549A6NIU2 RNU6-323P-201ENST00000521915 107 ntBASIC-2.57□□□□□ -2.82
LINC01549A6NIU2 AC073343.1-201ENST00000328239 651 ntBASIC-2.58□□□□□ -2.82
LINC01549A6NIU2 Y_RNA.203-201ENST00000364106 102 ntBASIC-2.58□□□□□ -2.82
LINC01549A6NIU2 RNU6-973P-201ENST00000364690 107 ntBASIC-2.58□□□□□ -2.82
LINC01549A6NIU2 RNU6-827P-201ENST00000365553 106 ntBASIC-2.58□□□□□ -2.82
LINC01549A6NIU2 Y_RNA.450-201ENST00000384198 113 ntBASIC-2.58□□□□□ -2.82
LINC01549A6NIU2 Y_RNA.457-201ENST00000384237 111 ntBASIC-2.58□□□□□ -2.82
LINC01549A6NIU2 TIMM9P2-201ENST00000419324 266 ntBASIC-2.58□□□□□ -2.82
LINC01549A6NIU2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-2.58□□□□□ -2.82
LINC01549A6NIU2 AC024405.2-202ENST00000532731 184 ntBASIC-2.58□□□□□ -2.82
LINC01549A6NIU2 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-2.58□□□□□ -2.82
LINC01549A6NIU2 AC104072.1-201ENST00000568817 668 ntBASIC-2.58□□□□□ -2.82
LINC01549A6NIU2 MIR8055-201ENST00000610739 97 ntBASIC-2.58□□□□□ -2.82
LINC01549A6NIU2 RNU6-226P-201ENST00000363778 107 ntBASIC-2.59□□□□□ -2.82
LINC01549A6NIU2 Y_RNA.253-201ENST00000364562 112 ntBASIC-2.59□□□□□ -2.82
LINC01549A6NIU2 MIR8485-201ENST00000401372 91 ntBASIC-2.59□□□□□ -2.82
LINC01549A6NIU2 MIR320C1-201ENST00000408566 88 ntBASIC-2.59□□□□□ -2.82
LINC01549A6NIU2 MTATP6P18-201ENST00000417994 673 ntBASIC-2.59□□□□□ -2.82
LINC01549A6NIU2 AC018710.1-201ENST00000506509 158 ntBASIC-2.59□□□□□ -2.82
LINC01549A6NIU2 MIR4789-201ENST00000577469 82 ntBASIC-2.59□□□□□ -2.82
LINC01549A6NIU2 MIR1246-201ENST00000636535 73 ntBASIC-2.59□□□□□ -2.82
LINC01549A6NIU2 RNU6-131P-201ENST00000391144 107 ntBASIC-2.6□□□□□ -2.83
LINC01549A6NIU2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-2.6□□□□□ -2.83
LINC01549A6NIU2 RNA5SP118-201ENST00000410385 109 ntBASIC-2.6□□□□□ -2.83
LINC01549A6NIU2 RNU6-602P-201ENST00000411155 105 ntBASIC-2.6□□□□□ -2.83
LINC01549A6NIU2 AL008987.1-201ENST00000415528 237 ntBASIC-2.6□□□□□ -2.83
LINC01549A6NIU2 USP9YP21-201ENST00000420603 432 ntBASIC-2.6□□□□□ -2.83
LINC01549A6NIU2 AC090616.2-202ENST00000584248 222 ntBASIC-2.6□□□□□ -2.83
LINC01549A6NIU2 MIR6129-201ENST00000616087 109 ntBASIC-2.6□□□□□ -2.83
LINC01549A6NIU2 RNU6-136P-201ENST00000384663 107 ntBASIC-2.61□□□□□ -2.83
LINC01549A6NIU2 RNU2-29P-201ENST00000410423 189 ntBASIC-2.61□□□□□ -2.83
LINC01549A6NIU2 RPL30P16-201ENST00000419341 429 ntBASIC-2.61□□□□□ -2.83
LINC01549A6NIU2 AL512286.1-201ENST00000439244 400 ntBASIC-2.61□□□□□ -2.83
LINC01549A6NIU2 RNU6-1194P-201ENST00000516208 104 ntBASIC-2.61□□□□□ -2.83
LINC01549A6NIU2 RNU7-51P-201ENST00000516560 62 ntBASIC-2.61□□□□□ -2.83
LINC01549A6NIU2 AP003733.2-201ENST00000529409 171 ntBASIC-2.61□□□□□ -2.83
LINC01549A6NIU2 Y_RNA.757-201ENST00000578934 114 ntBASIC-2.61□□□□□ -2.83
LINC01549A6NIU2 MIR3684-201ENST00000579779 74 ntBASIC-2.61□□□□□ -2.83
LINC01549A6NIU2 AC245014.2-201ENST00000603689 287 ntBASIC-2.61□□□□□ -2.83
LINC01549A6NIU2 5S_rRNA.13-201ENST00000622298 123 ntBASIC-2.61□□□□□ -2.83
LINC01549A6NIU2 Y_RNA.37-201ENST00000362606 108 ntBASIC-2.62□□□□□ -2.83
LINC01549A6NIU2 Y_RNA.128-201ENST00000363391 112 ntBASIC-2.62□□□□□ -2.83
LINC01549A6NIU2 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.62□□□□□ -2.83
LINC01549A6NIU2 Y_RNA.184-201ENST00000363884 108 ntBASIC-2.62□□□□□ -2.83
LINC01549A6NIU2 SNORD14E-201ENST00000364009 85 ntBASIC-2.62□□□□□ -2.83
LINC01549A6NIU2 RNU6-1062P-201ENST00000383908 107 ntBASIC-2.62□□□□□ -2.83
LINC01549A6NIU2 AC016907.1-201ENST00000419483 435 ntBASIC-2.62□□□□□ -2.83
LINC01549A6NIU2 USP9YP30-201ENST00000430729 455 ntBASIC-2.62□□□□□ -2.83
LINC01549A6NIU2 AL117351.1-201ENST00000438864 766 ntBASIC-2.62□□□□□ -2.83
LINC01549A6NIU2 HAR1A.1-201ENST00000459583 118 ntBASIC-2.62□□□□□ -2.83
LINC01549A6NIU2 RNU6-1178P-201ENST00000516674 107 ntBASIC-2.62□□□□□ -2.83
LINC01549A6NIU2 RNA5SP337-201ENST00000517007 109 ntBASIC-2.62□□□□□ -2.83
LINC01549A6NIU2 AC022784.5-201ENST00000522241 437 ntBASIC-2.62□□□□□ -2.83
LINC01549A6NIU2 MIR6854-201ENST00000614935 69 ntBASIC-2.62□□□□□ -2.83
LINC01549A6NIU2 Y_RNA.22-201ENST00000362492 102 ntBASIC-2.63□□□□□ -2.83
LINC01549A6NIU2 Y_RNA.114-201ENST00000363265 113 ntBASIC-2.63□□□□□ -2.83
LINC01549A6NIU2 Y_RNA.415-201ENST00000384012 112 ntBASIC-2.63□□□□□ -2.83
LINC01549A6NIU2 RNU6-481P-201ENST00000384194 107 ntBASIC-2.63□□□□□ -2.83
LINC01549A6NIU2 Y_RNA.517-201ENST00000384551 106 ntBASIC-2.63□□□□□ -2.83
LINC01549A6NIU2 SNORD12C-201ENST00000386307 89 ntBASIC-2.63□□□□□ -2.83
LINC01549A6NIU2 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-2.63□□□□□ -2.83
LINC01549A6NIU2 MTND1P11-201ENST00000456661 876 ntBASIC-2.63□□□□□ -2.83
LINC01549A6NIU2 Y_RNA.714-201ENST00000517065 90 ntBASIC-2.63□□□□□ -2.83
LINC01549A6NIU2 OSBPL9P5-201ENST00000542581 171 ntBASIC-2.63□□□□□ -2.83
LINC01549A6NIU2 MIR5704-201ENST00000584029 77 ntBASIC-2.63□□□□□ -2.83
LINC01549A6NIU2 AC069545.1-201ENST00000605671 358 ntBASIC-2.63□□□□□ -2.83
LINC01549A6NIU2 Y_RNA.35-201ENST00000362601 101 ntBASIC-2.64□□□□□ -2.83
LINC01549A6NIU2 SNORD115-35-201ENST00000365122 82 ntBASIC-2.64□□□□□ -2.83
LINC01549A6NIU2 RPS29P24-201ENST00000486345 171 ntBASIC-2.64□□□□□ -2.83
LINC01549A6NIU2 Y_RNA.56-201ENST00000362798 112 ntBASIC-2.65□□□□□ -2.83
LINC01549A6NIU2 RNU6-1286P-201ENST00000383871 107 ntBASIC-2.65□□□□□ -2.83
LINC01549A6NIU2 U6.112-201ENST00000384129 70 ntBASIC-2.65□□□□□ -2.83
LINC01549A6NIU2 RNU6-158P-201ENST00000517104 100 ntBASIC-2.65□□□□□ -2.83
LINC01549A6NIU2 MTND2P32-201ENST00000521584 1038 ntBASIC-2.65□□□□□ -2.83
LINC01549A6NIU2 MIR198-201ENST00000637333 62 ntBASIC-2.65□□□□□ -2.83
LINC01549A6NIU2 Y_RNA.220-201ENST00000364244 109 ntBASIC-2.66□□□□□ -2.84
LINC01549A6NIU2 MIR527-201ENST00000385244 85 ntBASIC-2.66□□□□□ -2.84
LINC01549A6NIU2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-2.66□□□□□ -2.84
LINC01549A6NIU2 AL354751.2-201ENST00000415471 210 ntBASIC-2.66□□□□□ -2.84
LINC01549A6NIU2 RNA5SP54-201ENST00000516951 92 ntBASIC-2.66□□□□□ -2.84
LINC01549A6NIU2 AC011603.4-201ENST00000611325 277 ntBASIC-2.66□□□□□ -2.84
LINC01549A6NIU2 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-2.66□□□□□ -2.84
LINC01549A6NIU2 RNU6-1309P-201ENST00000363305 108 ntBASIC-2.67□□□□□ -2.84
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms