Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 SNORD2.1-201ENST00000458762 69 ntBASIC2.1□□□□□ -2.07
TRIM43BA6NCK2 RNA5SP481-201ENST00000516814 122 ntBASIC2.1□□□□□ -2.07
TRIM43BA6NCK2 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.1□□□□□ -2.07
TRIM43BA6NCK2 RNU6-111P-201ENST00000517179 105 ntBASIC2.1□□□□□ -2.07
TRIM43BA6NCK2 AP002004.2-201ENST00000531656 154 ntBASIC2.1□□□□□ -2.07
TRIM43BA6NCK2 MIR4643-201ENST00000577473 78 ntBASIC2.1□□□□□ -2.07
TRIM43BA6NCK2 MIR5692C2-201ENST00000577959 77 ntBASIC2.1□□□□□ -2.07
TRIM43BA6NCK2 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.1□□□□□ -2.07
TRIM43BA6NCK2 AL442067.1-201ENST00000613261 223 ntBASIC2.1□□□□□ -2.07
TRIM43BA6NCK2 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.1□□□□□ -2.07
TRIM43BA6NCK2 AC084768.2-201ENST00000622736 221 ntBASIC2.1□□□□□ -2.07
TRIM43BA6NCK2 Y_RNA.552-201ENST00000384665 112 ntBASIC2.09□□□□□ -2.07
TRIM43BA6NCK2 MIR518E-201ENST00000385252 88 ntBASIC2.09□□□□□ -2.07
TRIM43BA6NCK2 AL606517.2-201ENST00000442855 241 ntBASIC2.09□□□□□ -2.07
TRIM43BA6NCK2 RPS27P1-201ENST00000450552 247 ntBASIC2.09□□□□□ -2.07
TRIM43BA6NCK2 AL358944.1-201ENST00000528537 144 ntBASIC2.09□□□□□ -2.07
TRIM43BA6NCK2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.09□□□□□ -2.07
TRIM43BA6NCK2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.09□□□□□ -2.07
TRIM43BA6NCK2 MIR4282-201ENST00000583613 67 ntBASIC2.09□□□□□ -2.07
TRIM43BA6NCK2 AC005357.1-201ENST00000588399 301 ntBASIC2.09□□□□□ -2.07
TRIM43BA6NCK2 AL627230.6-201ENST00000611129 280 ntBASIC2.09□□□□□ -2.07
TRIM43BA6NCK2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
TRIM43BA6NCK2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
TRIM43BA6NCK2 RNU6-144P-201ENST00000383951 107 ntBASIC2.08□□□□□ -2.08
TRIM43BA6NCK2 Y_RNA.515-201ENST00000384535 112 ntBASIC2.08□□□□□ -2.08
TRIM43BA6NCK2 RNU6-296P-201ENST00000384608 107 ntBASIC2.08□□□□□ -2.08
TRIM43BA6NCK2 SNORD58.1-201ENST00000391313 66 ntBASIC2.08□□□□□ -2.08
TRIM43BA6NCK2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.08□□□□□ -2.08
TRIM43BA6NCK2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.08□□□□□ -2.08
TRIM43BA6NCK2 MRPS17P9-201ENST00000511924 393 ntBASIC2.08□□□□□ -2.08
TRIM43BA6NCK2 RNU6-250P-201ENST00000516958 103 ntBASIC2.08□□□□□ -2.08
TRIM43BA6NCK2 RNU6-388P-201ENST00000517012 105 ntBASIC2.08□□□□□ -2.08
TRIM43BA6NCK2 RNU6-389P-201ENST00000517048 105 ntBASIC2.08□□□□□ -2.08
TRIM43BA6NCK2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.08□□□□□ -2.08
TRIM43BA6NCK2 SNORA1B-201ENST00000362535 133 ntBASIC2.07□□□□□ -2.08
TRIM43BA6NCK2 Y_RNA.76-201ENST00000362931 109 ntBASIC2.07□□□□□ -2.08
TRIM43BA6NCK2 Y_RNA.292-201ENST00000364904 97 ntBASIC2.07□□□□□ -2.08
TRIM43BA6NCK2 RN7SKP200-201ENST00000410564 320 ntBASIC2.07□□□□□ -2.08
TRIM43BA6NCK2 COX6CP10-201ENST00000416832 224 ntBASIC2.07□□□□□ -2.08
TRIM43BA6NCK2 RPL23AP6-201ENST00000446637 472 ntBASIC2.07□□□□□ -2.08
TRIM43BA6NCK2 RNU6-437P-201ENST00000459408 95 ntBASIC2.07□□□□□ -2.08
TRIM43BA6NCK2 RPS29P11-201ENST00000496507 171 ntBASIC2.07□□□□□ -2.08
TRIM43BA6NCK2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.07□□□□□ -2.08
TRIM43BA6NCK2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.07□□□□□ -2.08
TRIM43BA6NCK2 RNA5SP437-201ENST00000517249 129 ntBASIC2.07□□□□□ -2.08
TRIM43BA6NCK2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.07□□□□□ -2.08
TRIM43BA6NCK2 AC012493.3-201ENST00000604494 112 ntBASIC2.07□□□□□ -2.08
TRIM43BA6NCK2 AL773524.1-201ENST00000614065 229 ntBASIC2.07□□□□□ -2.08
TRIM43BA6NCK2 MIR8054-201ENST00000620877 86 ntBASIC2.07□□□□□ -2.08
TRIM43BA6NCK2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
TRIM43BA6NCK2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
TRIM43BA6NCK2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
TRIM43BA6NCK2 MIR367-201ENST00000362299 68 ntBASIC2.06□□□□□ -2.08
TRIM43BA6NCK2 Y_RNA.265-201ENST00000364677 108 ntBASIC2.06□□□□□ -2.08
TRIM43BA6NCK2 RNU6-1080P-201ENST00000383982 107 ntBASIC2.06□□□□□ -2.08
TRIM43BA6NCK2 RNU6-440P-201ENST00000390882 105 ntBASIC2.06□□□□□ -2.08
TRIM43BA6NCK2 AC244636.1-201ENST00000421152 228 ntBASIC2.06□□□□□ -2.08
TRIM43BA6NCK2 HSPE1P9-201ENST00000440046 311 ntBASIC2.06□□□□□ -2.08
TRIM43BA6NCK2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.06□□□□□ -2.08
TRIM43BA6NCK2 AL049830.1-201ENST00000468034 425 ntBASIC2.06□□□□□ -2.08
TRIM43BA6NCK2 SNORD116-28-201ENST00000516123 91 ntBASIC2.06□□□□□ -2.08
TRIM43BA6NCK2 SNORA31.17-201ENST00000516953 127 ntBASIC2.06□□□□□ -2.08
TRIM43BA6NCK2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.06□□□□□ -2.08
TRIM43BA6NCK2 SNORA28-201ENST00000606769 126 ntBASIC2.06□□□□□ -2.08
TRIM43BA6NCK2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.06□□□□□ -2.08
TRIM43BA6NCK2 Y_RNA.203-201ENST00000364106 102 ntBASIC2.05□□□□□ -2.08
TRIM43BA6NCK2 RNU6-847P-201ENST00000411115 108 ntBASIC2.05□□□□□ -2.08
TRIM43BA6NCK2 AC009310.1-201ENST00000414414 451 ntBASIC2.05□□□□□ -2.08
TRIM43BA6NCK2 snoU13.27-201ENST00000459278 104 ntBASIC2.05□□□□□ -2.08
TRIM43BA6NCK2 RNU7-34P-201ENST00000459394 64 ntBASIC2.05□□□□□ -2.08
TRIM43BA6NCK2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.05□□□□□ -2.08
TRIM43BA6NCK2 RNU7-28P-201ENST00000516759 62 ntBASIC2.05□□□□□ -2.08
TRIM43BA6NCK2 MIR4709-201ENST00000577272 72 ntBASIC2.05□□□□□ -2.08
TRIM43BA6NCK2 MIR4724-201ENST00000579485 89 ntBASIC2.05□□□□□ -2.08
TRIM43BA6NCK2 MIR3935-201ENST00000583472 104 ntBASIC2.05□□□□□ -2.08
TRIM43BA6NCK2 AL929325.1-201ENST00000603096 117 ntBASIC2.05□□□□□ -2.08
TRIM43BA6NCK2 AL096840.1-201ENST00000603287 93 ntBASIC2.05□□□□□ -2.08
TRIM43BA6NCK2 Y_RNA.802-201ENST00000614892 130 ntBASIC2.05□□□□□ -2.08
TRIM43BA6NCK2 AC141273.2-201ENST00000618989 130 ntBASIC2.05□□□□□ -2.08
TRIM43BA6NCK2 AC078938.1-201ENST00000620993 318 ntBASIC2.05□□□□□ -2.08
TRIM43BA6NCK2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
TRIM43BA6NCK2 Y_RNA.262-201ENST00000364641 102 ntBASIC2.04□□□□□ -2.08
TRIM43BA6NCK2 Y_RNA.304-201ENST00000365011 112 ntBASIC2.04□□□□□ -2.08
TRIM43BA6NCK2 SNORA4.2-201ENST00000365313 147 ntBASIC2.04□□□□□ -2.08
TRIM43BA6NCK2 SNORA8.3-201ENST00000384679 139 ntBASIC2.04□□□□□ -2.08
TRIM43BA6NCK2 AL034345.1-201ENST00000407768 123 ntBASIC2.04□□□□□ -2.08
TRIM43BA6NCK2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.04□□□□□ -2.08
TRIM43BA6NCK2 STAG3L5P-204ENST00000443759 179 ntBASIC2.04□□□□□ -2.08
TRIM43BA6NCK2 RN7SL274P-201ENST00000492268 272 ntBASIC2.04□□□□□ -2.08
TRIM43BA6NCK2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.04□□□□□ -2.08
TRIM43BA6NCK2 DNAJC19P9-201ENST00000555084 351 ntBASIC2.04□□□□□ -2.08
TRIM43BA6NCK2 MIR3671-201ENST00000580455 88 ntBASIC2.04□□□□□ -2.08
TRIM43BA6NCK2 MIR2681-201ENST00000581814 105 ntBASIC2.04□□□□□ -2.08
TRIM43BA6NCK2 BX248123.2-201ENST00000606318 124 ntBASIC2.04□□□□□ -2.08
TRIM43BA6NCK2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.04□□□□□ -2.08
TRIM43BA6NCK2 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRIM43BA6NCK2 RNU6-674P-201ENST00000363831 107 ntBASIC2.03□□□□□ -2.08
TRIM43BA6NCK2 RNY1-201ENST00000364228 113 ntBASIC2.03□□□□□ -2.08
TRIM43BA6NCK2 SNORA67.5-201ENST00000391036 107 ntBASIC2.03□□□□□ -2.08
TRIM43BA6NCK2 RNA5SP482-201ENST00000391269 118 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms