Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 AC093027.1-201ENST00000546698 429 ntBASIC0.56□□□□□ -2.32
TRAV39A0A0B4J263 MIR4452-201ENST00000583004 71 ntBASIC0.56□□□□□ -2.32
TRAV39A0A0B4J263 AC133104.2-201ENST00000615272 193 ntBASIC0.56□□□□□ -2.32
TRAV39A0A0B4J263 AC138305.3-201ENST00000624988 240 ntBASIC0.56□□□□□ -2.32
TRAV39A0A0B4J263 AL442644.1-201ENST00000454390 3105 ntBASIC0.55□□□□□ -2.32
TRAV39A0A0B4J263 RNA5SP48-201ENST00000363969 126 ntBASIC0.55□□□□□ -2.32
TRAV39A0A0B4J263 SNORD14E-201ENST00000364009 85 ntBASIC0.55□□□□□ -2.32
TRAV39A0A0B4J263 MIR559-201ENST00000385188 96 ntBASIC0.55□□□□□ -2.32
TRAV39A0A0B4J263 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.55□□□□□ -2.32
TRAV39A0A0B4J263 RNU6-994P-201ENST00000410507 111 ntBASIC0.55□□□□□ -2.32
TRAV39A0A0B4J263 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.55□□□□□ -2.32
TRAV39A0A0B4J263 AC012433.1-201ENST00000588916 398 ntBASIC0.55□□□□□ -2.32
TRAV39A0A0B4J263 POLR3GP1-201ENST00000594073 261 ntBASIC0.55□□□□□ -2.32
TRAV39A0A0B4J263 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV39A0A0B4J263 AC134026.1-201ENST00000623249 2239 ntBASIC0.54□□□□□ -2.32
TRAV39A0A0B4J263 Y_RNA.27-201ENST00000362540 103 ntBASIC0.54□□□□□ -2.32
TRAV39A0A0B4J263 RNU6-490P-201ENST00000362985 107 ntBASIC0.54□□□□□ -2.32
TRAV39A0A0B4J263 Y_RNA.230-201ENST00000364348 109 ntBASIC0.54□□□□□ -2.32
TRAV39A0A0B4J263 RNU6-654P-201ENST00000364373 107 ntBASIC0.54□□□□□ -2.32
TRAV39A0A0B4J263 MIR570-201ENST00000384917 97 ntBASIC0.54□□□□□ -2.32
TRAV39A0A0B4J263 MIR802-201ENST00000390235 94 ntBASIC0.54□□□□□ -2.32
TRAV39A0A0B4J263 AL590004.1-201ENST00000405321 300 ntBASIC0.54□□□□□ -2.32
TRAV39A0A0B4J263 MTCO2P27-201ENST00000420740 428 ntBASIC0.54□□□□□ -2.32
TRAV39A0A0B4J263 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV39A0A0B4J263 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV39A0A0B4J263 AC099799.1-201ENST00000439809 192 ntBASIC0.54□□□□□ -2.32
TRAV39A0A0B4J263 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV39A0A0B4J263 AC067940.1-201ENST00000458411 300 ntBASIC0.54□□□□□ -2.32
TRAV39A0A0B4J263 RPS29P1-201ENST00000465274 159 ntBASIC0.54□□□□□ -2.32
TRAV39A0A0B4J263 RNA5SP220-201ENST00000516298 104 ntBASIC0.54□□□□□ -2.32
TRAV39A0A0B4J263 AC004812.1-201ENST00000540773 146 ntBASIC0.54□□□□□ -2.32
TRAV39A0A0B4J263 AC005730.3-201ENST00000583067 366 ntBASIC0.54□□□□□ -2.32
TRAV39A0A0B4J263 DEFB117-201ENST00000602356 141 ntBASIC0.54□□□□□ -2.32
TRAV39A0A0B4J263 AL078603.1-201ENST00000603824 313 ntBASIC0.54□□□□□ -2.32
TRAV39A0A0B4J263 MIR4251-201ENST00000635819 61 ntBASIC0.54□□□□□ -2.32
TRAV39A0A0B4J263 Y_RNA.224-201ENST00000364308 111 ntBASIC0.53□□□□□ -2.32
TRAV39A0A0B4J263 Y_RNA.331-201ENST00000365267 102 ntBASIC0.53□□□□□ -2.32
TRAV39A0A0B4J263 SNORD28B-201ENST00000390993 75 ntBASIC0.53□□□□□ -2.32
TRAV39A0A0B4J263 RNA5SP95-201ENST00000410319 137 ntBASIC0.53□□□□□ -2.32
TRAV39A0A0B4J263 RNU6-710P-201ENST00000410424 105 ntBASIC0.53□□□□□ -2.32
TRAV39A0A0B4J263 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.53□□□□□ -2.32
TRAV39A0A0B4J263 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.53□□□□□ -2.32
TRAV39A0A0B4J263 AC005042.3-201ENST00000453230 174 ntBASIC0.53□□□□□ -2.32
TRAV39A0A0B4J263 U8.19-201ENST00000459095 133 ntBASIC0.53□□□□□ -2.32
TRAV39A0A0B4J263 U7.7-201ENST00000459276 60 ntBASIC0.53□□□□□ -2.32
TRAV39A0A0B4J263 RPL23AP54-201ENST00000495129 419 ntBASIC0.53□□□□□ -2.32
TRAV39A0A0B4J263 AC036111.3-201ENST00000526389 112 ntBASIC0.53□□□□□ -2.32
TRAV39A0A0B4J263 AP003484.1-201ENST00000530974 250 ntBASIC0.53□□□□□ -2.32
TRAV39A0A0B4J263 MIR548AR-201ENST00000582191 57 ntBASIC0.53□□□□□ -2.32
TRAV39A0A0B4J263 AL590095.2-201ENST00000604136 117 ntBASIC0.53□□□□□ -2.32
TRAV39A0A0B4J263 JPX_2.1-201ENST00000614161 69 ntBASIC0.53□□□□□ -2.32
TRAV39A0A0B4J263 AC008133.2-201ENST00000624540 351 ntBASIC0.53□□□□□ -2.32
TRAV39A0A0B4J263 SNORD38C-201ENST00000384381 69 ntBASIC0.52□□□□□ -2.33
TRAV39A0A0B4J263 SNORA2B-201ENST00000384583 137 ntBASIC0.52□□□□□ -2.33
TRAV39A0A0B4J263 Y_RNA.570-201ENST00000384750 101 ntBASIC0.52□□□□□ -2.33
TRAV39A0A0B4J263 MIR518E-201ENST00000385252 88 ntBASIC0.52□□□□□ -2.33
TRAV39A0A0B4J263 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.52□□□□□ -2.33
TRAV39A0A0B4J263 MIR1287-201ENST00000408492 90 ntBASIC0.52□□□□□ -2.33
TRAV39A0A0B4J263 AC098614.3-201ENST00000438957 440 ntBASIC0.52□□□□□ -2.33
TRAV39A0A0B4J263 COX6CP6-201ENST00000490840 228 ntBASIC0.52□□□□□ -2.33
TRAV39A0A0B4J263 AC113410.1-201ENST00000505029 247 ntBASIC0.52□□□□□ -2.33
TRAV39A0A0B4J263 RNU6-911P-201ENST00000516523 104 ntBASIC0.52□□□□□ -2.33
TRAV39A0A0B4J263 AC024405.2-202ENST00000532731 184 ntBASIC0.52□□□□□ -2.33
TRAV39A0A0B4J263 CYP3A137P-201ENST00000562436 69 ntBASIC0.52□□□□□ -2.33
TRAV39A0A0B4J263 MIR3145-201ENST00000580727 82 ntBASIC0.52□□□□□ -2.33
TRAV39A0A0B4J263 MIR4300-201ENST00000581016 96 ntBASIC0.52□□□□□ -2.33
TRAV39A0A0B4J263 MIR151B-201ENST00000584249 96 ntBASIC0.52□□□□□ -2.33
TRAV39A0A0B4J263 VN1R91P-201ENST00000594377 169 ntBASIC0.52□□□□□ -2.33
TRAV39A0A0B4J263 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.52□□□□□ -2.33
TRAV39A0A0B4J263 Y_RNA.203-201ENST00000364106 102 ntBASIC0.51□□□□□ -2.33
TRAV39A0A0B4J263 Y_RNA.310-201ENST00000365063 113 ntBASIC0.51□□□□□ -2.33
TRAV39A0A0B4J263 Y_RNA.387-201ENST00000383918 102 ntBASIC0.51□□□□□ -2.33
TRAV39A0A0B4J263 RNU6-1323P-201ENST00000384025 107 ntBASIC0.51□□□□□ -2.33
TRAV39A0A0B4J263 AC005534.2-201ENST00000431047 433 ntBASIC0.51□□□□□ -2.33
TRAV39A0A0B4J263 AC091951.2-201ENST00000500762 203 ntBASIC0.51□□□□□ -2.33
TRAV39A0A0B4J263 AC133485.1-201ENST00000567176 124 ntBASIC0.51□□□□□ -2.33
TRAV39A0A0B4J263 AC138907.6-201ENST00000568401 126 ntBASIC0.51□□□□□ -2.33
TRAV39A0A0B4J263 AL355073.2-201ENST00000612106 557 ntBASIC0.51□□□□□ -2.33
TRAV39A0A0B4J263 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
TRAV39A0A0B4J263 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.51□□□□□ -2.33
TRAV39A0A0B4J263 MIR6516-201ENST00000630554 81 ntBASIC0.51□□□□□ -2.33
TRAV39A0A0B4J263 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
TRAV39A0A0B4J263 Y_RNA.142-201ENST00000363491 102 ntBASIC0.5□□□□□ -2.33
TRAV39A0A0B4J263 Y_RNA.226-201ENST00000364337 114 ntBASIC0.5□□□□□ -2.33
TRAV39A0A0B4J263 Y_RNA.238-201ENST00000364441 102 ntBASIC0.5□□□□□ -2.33
TRAV39A0A0B4J263 U8.7-201ENST00000364940 136 ntBASIC0.5□□□□□ -2.33
TRAV39A0A0B4J263 Y_RNA.384-201ENST00000383909 102 ntBASIC0.5□□□□□ -2.33
TRAV39A0A0B4J263 RNU6-1040P-201ENST00000383974 107 ntBASIC0.5□□□□□ -2.33
TRAV39A0A0B4J263 Y_RNA.428-201ENST00000384078 102 ntBASIC0.5□□□□□ -2.33
TRAV39A0A0B4J263 SNORD116-29-201ENST00000384516 83 ntBASIC0.5□□□□□ -2.33
TRAV39A0A0B4J263 RNY4P36-201ENST00000391116 96 ntBASIC0.5□□□□□ -2.33
TRAV39A0A0B4J263 SNORD111-201ENST00000408139 94 ntBASIC0.5□□□□□ -2.33
TRAV39A0A0B4J263 MIR1302-7-201ENST00000408841 72 ntBASIC0.5□□□□□ -2.33
TRAV39A0A0B4J263 RNA5SP247-201ENST00000411181 105 ntBASIC0.5□□□□□ -2.33
TRAV39A0A0B4J263 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.5□□□□□ -2.33
TRAV39A0A0B4J263 Y_RNA.661-201ENST00000516003 99 ntBASIC0.5□□□□□ -2.33
TRAV39A0A0B4J263 RNU7-110P-201ENST00000516891 62 ntBASIC0.5□□□□□ -2.33
TRAV39A0A0B4J263 RNU7-116P-201ENST00000516940 62 ntBASIC0.5□□□□□ -2.33
TRAV39A0A0B4J263 AC011195.1-201ENST00000578177 177 ntBASIC0.5□□□□□ -2.33
TRAV39A0A0B4J263 AC025627.3-201ENST00000582078 182 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 533 ms