Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb3S4R1G7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb3S4R1G7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb3S4R1G7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb3S4R1G7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb3S4R1G7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb3S4R1G7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb3S4R1G7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
H2afb3S4R1G7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb3S4R1G7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb3S4R1G7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb3S4R1G7 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb3S4R1G7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Mir5130-201ENSMUST00000175160 84 ntBASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Mir1668-201ENSMUST00000184114 107 ntBASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.45□□□□□ -0.1
H2afb3S4R1G7 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb3S4R1G7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.44□□□□□ -0.1
H2afb3S4R1G7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Gm13559-201ENSMUST00000120476 863 ntBASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Gm26039-201ENSMUST00000158152 144 ntBASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Gm36967-201ENSMUST00000193814 266 ntBASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms