Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcsQ9WU84 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CcsQ9WU84 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcsQ9WU84 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.5□□□□□ -0.41
CcsQ9WU84 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.5□□□□□ -0.41
CcsQ9WU84 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CcsQ9WU84 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.5□□□□□ -0.41
CcsQ9WU84 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.5□□□□□ -0.41
CcsQ9WU84 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CcsQ9WU84 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcsQ9WU84 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CcsQ9WU84 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcsQ9WU84 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcsQ9WU84 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.5□□□□□ -0.41
CcsQ9WU84 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CcsQ9WU84 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcsQ9WU84 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcsQ9WU84 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcsQ9WU84 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcsQ9WU84 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcsQ9WU84 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CcsQ9WU84 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcsQ9WU84 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.5□□□□□ -0.41
CcsQ9WU84 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.5□□□□□ -0.41
CcsQ9WU84 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CcsQ9WU84 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.5□□□□□ -0.41
CcsQ9WU84 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcsQ9WU84 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.5□□□□□ -0.41
CcsQ9WU84 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CcsQ9WU84 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CcsQ9WU84 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CcsQ9WU84 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcsQ9WU84 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcsQ9WU84 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CcsQ9WU84 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CcsQ9WU84 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcsQ9WU84 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcsQ9WU84 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CcsQ9WU84 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcsQ9WU84 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CcsQ9WU84 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CcsQ9WU84 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcsQ9WU84 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CcsQ9WU84 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcsQ9WU84 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.49□□□□□ -0.41
CcsQ9WU84 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CcsQ9WU84 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcsQ9WU84 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CcsQ9WU84 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcsQ9WU84 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.49□□□□□ -0.41
CcsQ9WU84 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.49□□□□□ -0.41
CcsQ9WU84 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.49□□□□□ -0.41
CcsQ9WU84 Mir2861-201ENSMUST00000175539 82 ntBASIC12.49□□□□□ -0.41
CcsQ9WU84 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CcsQ9WU84 Gm43183-201ENSMUST00000200632 547 ntBASIC12.49□□□□□ -0.41
CcsQ9WU84 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
CcsQ9WU84 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.49□□□□□ -0.41
CcsQ9WU84 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CcsQ9WU84 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CcsQ9WU84 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.49□□□□□ -0.41
CcsQ9WU84 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcsQ9WU84 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CcsQ9WU84 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CcsQ9WU84 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CcsQ9WU84 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcsQ9WU84 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcsQ9WU84 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcsQ9WU84 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcsQ9WU84 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcsQ9WU84 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcsQ9WU84 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CcsQ9WU84 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcsQ9WU84 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcsQ9WU84 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcsQ9WU84 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcsQ9WU84 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CcsQ9WU84 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.48□□□□□ -0.41
CcsQ9WU84 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
CcsQ9WU84 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcsQ9WU84 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CcsQ9WU84 Sybu-209ENSMUST00000228639 4113 ntBASIC12.48□□□□□ -0.41
CcsQ9WU84 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcsQ9WU84 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcsQ9WU84 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcsQ9WU84 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CcsQ9WU84 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.48□□□□□ -0.41
CcsQ9WU84 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.48□□□□□ -0.41
CcsQ9WU84 Gm42545-201ENSMUST00000202755 922 ntBASIC12.48□□□□□ -0.41
CcsQ9WU84 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.48□□□□□ -0.41
CcsQ9WU84 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CcsQ9WU84 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CcsQ9WU84 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcsQ9WU84 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcsQ9WU84 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CcsQ9WU84 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcsQ9WU84 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcsQ9WU84 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
CcsQ9WU84 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcsQ9WU84 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcsQ9WU84 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms