Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Gm10231-201ENSMUST00000181584 441 ntBASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Gm10175-202ENSMUST00000208752 441 ntBASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh5Q9QUM7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh5Q9QUM7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Msh5Q9QUM7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh5Q9QUM7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Msh5Q9QUM7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Msh5Q9QUM7 Gm22697-201ENSMUST00000175194 63 ntBASIC16.43■□□□□ 0.22
Msh5Q9QUM7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.43■□□□□ 0.22
Msh5Q9QUM7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh5Q9QUM7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Msh5Q9QUM7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh5Q9QUM7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Msh5Q9QUM7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh5Q9QUM7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh5Q9QUM7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh5Q9QUM7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Msh5Q9QUM7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Msh5Q9QUM7 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh5Q9QUM7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Mir1668-201ENSMUST00000184114 107 ntBASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.42■□□□□ 0.22
Msh5Q9QUM7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Msh5Q9QUM7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Msh5Q9QUM7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Msh5Q9QUM7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Msh5Q9QUM7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms