Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Gm42473-201ENSMUST00000201056 2291 ntBASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 AW822252-206ENSMUST00000208904 237 ntBASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Vti1a-206ENSMUST00000225529 1244 ntBASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sec61bQ9CQS8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Gm8502-201ENSMUST00000185708 901 ntBASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Gm21147-201ENSMUST00000186046 913 ntBASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Gm8510-201ENSMUST00000189202 895 ntBASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Gm2316-201ENSMUST00000190613 921 ntBASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Gm8655-201ENSMUST00000221159 852 ntBASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Fcho2-208ENSMUST00000224992 2964 ntBASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sec61bQ9CQS8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sec61bQ9CQS8 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sec61bQ9CQS8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sec61bQ9CQS8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Sec61bQ9CQS8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sec61bQ9CQS8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms