Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Gm10355-201ENSMUST00000097146 517 ntBASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm7Q9CQQ8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.16■□□□□ 0.18
Lsm7Q9CQQ8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm7Q9CQQ8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm7Q9CQQ8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm7Q9CQQ8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm7Q9CQQ8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm7Q9CQQ8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm7Q9CQQ8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Lsm7Q9CQQ8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm7Q9CQQ8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm7Q9CQQ8 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.16■□□□□ 0.18
Lsm7Q9CQQ8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Lsm7Q9CQQ8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm7Q9CQQ8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm7Q9CQQ8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm7Q9CQQ8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.16■□□□□ 0.18
Lsm7Q9CQQ8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm7Q9CQQ8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm7Q9CQQ8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm7Q9CQQ8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Gm8097-201ENSMUST00000117903 829 ntBASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm7Q9CQQ8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Lsm7Q9CQQ8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Lsm7Q9CQQ8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Lsm7Q9CQQ8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms