Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc1bQ920F6 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smc1bQ920F6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Smc1bQ920F6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smc1bQ920F6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc1bQ920F6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc1bQ920F6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smc1bQ920F6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc1bQ920F6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc1bQ920F6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc1bQ920F6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc1bQ920F6 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc1bQ920F6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smc1bQ920F6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smc1bQ920F6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.46■□□□□ 0.55
Smc1bQ920F6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.46■□□□□ 0.55
Smc1bQ920F6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.46■□□□□ 0.55
Smc1bQ920F6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smc1bQ920F6 Psmb5-202ENSMUST00000227257 622 ntBASIC18.46■□□□□ 0.55
Smc1bQ920F6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc1bQ920F6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc1bQ920F6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Smc1bQ920F6 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc1bQ920F6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc1bQ920F6 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.46■□□□□ 0.55
Smc1bQ920F6 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smc1bQ920F6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc1bQ920F6 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc1bQ920F6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smc1bQ920F6 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Smc1bQ920F6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.45■□□□□ 0.54
Smc1bQ920F6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc1bQ920F6 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc1bQ920F6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc1bQ920F6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc1bQ920F6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc1bQ920F6 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Smc1bQ920F6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc1bQ920F6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smc1bQ920F6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Smc1bQ920F6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc1bQ920F6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc1bQ920F6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smc1bQ920F6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smc1bQ920F6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smc1bQ920F6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smc1bQ920F6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Smc1bQ920F6 Gm44450-201ENSMUST00000199528 114 ntBASIC18.44■□□□□ 0.54
Smc1bQ920F6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smc1bQ920F6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Smc1bQ920F6 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smc1bQ920F6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smc1bQ920F6 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smc1bQ920F6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.44■□□□□ 0.54
Smc1bQ920F6 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smc1bQ920F6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Smc1bQ920F6 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smc1bQ920F6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smc1bQ920F6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smc1bQ920F6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
Smc1bQ920F6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smc1bQ920F6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Smc1bQ920F6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Smc1bQ920F6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc1bQ920F6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Smc1bQ920F6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc1bQ920F6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.43■□□□□ 0.54
Smc1bQ920F6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.43■□□□□ 0.54
Smc1bQ920F6 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc1bQ920F6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.43■□□□□ 0.54
Smc1bQ920F6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.43■□□□□ 0.54
Smc1bQ920F6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc1bQ920F6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smc1bQ920F6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc1bQ920F6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc1bQ920F6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smc1bQ920F6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc1bQ920F6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms