Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.52■□□□□ 0.08
Pcdhga11Q91XY8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.52■□□□□ 0.08
Pcdhga11Q91XY8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdhga11Q91XY8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhga11Q91XY8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga11Q91XY8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga11Q91XY8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhga11Q91XY8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhga11Q91XY8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhga11Q91XY8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhga11Q91XY8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhga11Q91XY8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhga11Q91XY8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Pcdhga11Q91XY8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Pcdhga11Q91XY8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhga11Q91XY8 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Gm18101-201ENSMUST00000215769 548 ntBASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga11Q91XY8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga11Q91XY8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhga11Q91XY8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga11Q91XY8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga11Q91XY8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pcdhga11Q91XY8 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga11Q91XY8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga11Q91XY8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga11Q91XY8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga11Q91XY8 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhga11Q91XY8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Pcdhga11Q91XY8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhga11Q91XY8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga11Q91XY8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhga11Q91XY8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga11Q91XY8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga11Q91XY8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pcdhga11Q91XY8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga11Q91XY8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga11Q91XY8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Gm22697-201ENSMUST00000175194 63 ntBASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga11Q91XY8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms