Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
H1fooQ8VIK3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Gm18032-201ENSMUST00000222541 538 ntBASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H1fooQ8VIK3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H1fooQ8VIK3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H1fooQ8VIK3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
H1fooQ8VIK3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H1fooQ8VIK3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
H1fooQ8VIK3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H1fooQ8VIK3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H1fooQ8VIK3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H1fooQ8VIK3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
H1fooQ8VIK3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H1fooQ8VIK3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H1fooQ8VIK3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
H1fooQ8VIK3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.46□□□□□ -0.25
H1fooQ8VIK3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H1fooQ8VIK3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
H1fooQ8VIK3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
H1fooQ8VIK3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H1fooQ8VIK3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H1fooQ8VIK3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H1fooQ8VIK3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
H1fooQ8VIK3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
H1fooQ8VIK3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
H1fooQ8VIK3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
H1fooQ8VIK3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
H1fooQ8VIK3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
H1fooQ8VIK3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.46□□□□□ -0.26
H1fooQ8VIK3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
H1fooQ8VIK3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
H1fooQ8VIK3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
H1fooQ8VIK3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
H1fooQ8VIK3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
H1fooQ8VIK3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
H1fooQ8VIK3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Gm10013-201ENSMUST00000106074 672 ntBASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
H1fooQ8VIK3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms