Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc9Q8VC31 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc9Q8VC31 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc9Q8VC31 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc9Q8VC31 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.41■□□□□ 0.7
Ccdc9Q8VC31 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 Gm42901-201ENSMUST00000197735 3171 ntBASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 App-207ENSMUST00000227737 2827 ntBASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc9Q8VC31 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc9Q8VC31 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc9Q8VC31 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc9Q8VC31 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc9Q8VC31 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc9Q8VC31 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc9Q8VC31 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc9Q8VC31 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc9Q8VC31 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc9Q8VC31 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Ccdc9Q8VC31 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc9Q8VC31 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc9Q8VC31 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc9Q8VC31 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc9Q8VC31 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC19.38■□□□□ 0.69
Ccdc9Q8VC31 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ccdc9Q8VC31 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc9Q8VC31 Gm42569-201ENSMUST00000200539 472 ntBASIC19.38■□□□□ 0.69
Ccdc9Q8VC31 Gm29791-202ENSMUST00000207888 369 ntBASIC19.38■□□□□ 0.69
Ccdc9Q8VC31 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.38■□□□□ 0.69
Ccdc9Q8VC31 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc9Q8VC31 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc9Q8VC31 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc9Q8VC31 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc9Q8VC31 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc9Q8VC31 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc9Q8VC31 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc9Q8VC31 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ccdc9Q8VC31 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc9Q8VC31 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc9Q8VC31 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.37■□□□□ 0.69
Ccdc9Q8VC31 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc9Q8VC31 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc9Q8VC31 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc9Q8VC31 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc9Q8VC31 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc9Q8VC31 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Ccdc9Q8VC31 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc9Q8VC31 Gm26571-201ENSMUST00000181399 666 ntBASIC19.37■□□□□ 0.69
Ccdc9Q8VC31 Gm6420-201ENSMUST00000193885 723 ntBASIC19.37■□□□□ 0.69
Ccdc9Q8VC31 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc9Q8VC31 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc9Q8VC31 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc9Q8VC31 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc9Q8VC31 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc9Q8VC31 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc9Q8VC31 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc9Q8VC31 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc9Q8VC31 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc9Q8VC31 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc9Q8VC31 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc9Q8VC31 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc9Q8VC31 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc9Q8VC31 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc9Q8VC31 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Ccdc9Q8VC31 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.36■□□□□ 0.69
Ccdc9Q8VC31 Gm22325-201ENSMUST00000158904 308 ntBASIC19.36■□□□□ 0.69
Ccdc9Q8VC31 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc9Q8VC31 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc9Q8VC31 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc9Q8VC31 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc9Q8VC31 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc9Q8VC31 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc9Q8VC31 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc9Q8VC31 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms