Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Gm26039-201ENSMUST00000158152 144 ntBASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smim4Q8C1Q6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smim4Q8C1Q6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smim4Q8C1Q6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
Smim4Q8C1Q6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Smim4Q8C1Q6 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.46□□□□□ -0.26
Smim4Q8C1Q6 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smim4Q8C1Q6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.46□□□□□ -0.26
Smim4Q8C1Q6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smim4Q8C1Q6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smim4Q8C1Q6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Smim4Q8C1Q6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smim4Q8C1Q6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
Smim4Q8C1Q6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smim4Q8C1Q6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smim4Q8C1Q6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smim4Q8C1Q6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smim4Q8C1Q6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Smim4Q8C1Q6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smim4Q8C1Q6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smim4Q8C1Q6 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Smim4Q8C1Q6 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Smim4Q8C1Q6 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Smim4Q8C1Q6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smim4Q8C1Q6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smim4Q8C1Q6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms