Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rif1Q6PR54 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rif1Q6PR54 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.5□□□□□ -0.25
Rif1Q6PR54 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rif1Q6PR54 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.5□□□□□ -0.25
Rif1Q6PR54 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rif1Q6PR54 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.5□□□□□ -0.25
Rif1Q6PR54 Thap2-203ENSMUST00000218989 527 ntBASIC13.5□□□□□ -0.25
Rif1Q6PR54 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Rif1Q6PR54 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.5□□□□□ -0.25
Rif1Q6PR54 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rif1Q6PR54 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.5□□□□□ -0.25
Rif1Q6PR54 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rif1Q6PR54 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rif1Q6PR54 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.5□□□□□ -0.25
Rif1Q6PR54 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.5□□□□□ -0.25
Rif1Q6PR54 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.5□□□□□ -0.25
Rif1Q6PR54 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rif1Q6PR54 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.5□□□□□ -0.25
Rif1Q6PR54 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC13.5□□□□□ -0.25
Rif1Q6PR54 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.5□□□□□ -0.25
Rif1Q6PR54 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rif1Q6PR54 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rif1Q6PR54 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rif1Q6PR54 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rif1Q6PR54 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.49□□□□□ -0.25
Rif1Q6PR54 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Gm9908-201ENSMUST00000211534 448 ntBASIC13.49□□□□□ -0.25
Rif1Q6PR54 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.49□□□□□ -0.25
Rif1Q6PR54 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Gm10499-201ENSMUST00000174094 934 ntBASIC13.49□□□□□ -0.25
Rif1Q6PR54 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.49□□□□□ -0.25
Rif1Q6PR54 Gm45167-201ENSMUST00000208007 322 ntBASIC13.49□□□□□ -0.25
Rif1Q6PR54 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Rif1Q6PR54 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rif1Q6PR54 BC021767-201ENSMUST00000126387 1716 ntBASIC13.48□□□□□ -0.25
Rif1Q6PR54 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.48□□□□□ -0.25
Rif1Q6PR54 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rif1Q6PR54 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Gm6745-201ENSMUST00000199216 526 ntBASIC13.48□□□□□ -0.25
Rif1Q6PR54 Gm43125-201ENSMUST00000201724 730 ntBASIC13.48□□□□□ -0.25
Rif1Q6PR54 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms