Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt40Q6IFX3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Krt40Q6IFX3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt40Q6IFX3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt40Q6IFX3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt40Q6IFX3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt40Q6IFX3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.83■□□□□ 0.6
Krt40Q6IFX3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.83■□□□□ 0.6
Krt40Q6IFX3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt40Q6IFX3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt40Q6IFX3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt40Q6IFX3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt40Q6IFX3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.81■□□□□ 0.6
Krt40Q6IFX3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt40Q6IFX3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Gm27628-201ENSMUST00000184911 107 ntBASIC18.8■□□□□ 0.6
Krt40Q6IFX3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Gm5364-201ENSMUST00000216789 889 ntBASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Psmb5-202ENSMUST00000227257 622 ntBASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt40Q6IFX3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Krt40Q6IFX3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt40Q6IFX3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt40Q6IFX3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt40Q6IFX3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Krt40Q6IFX3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt40Q6IFX3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt40Q6IFX3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt40Q6IFX3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt40Q6IFX3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt40Q6IFX3 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.79■□□□□ 0.6
Krt40Q6IFX3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.79■□□□□ 0.6
Krt40Q6IFX3 Gm5682-201ENSMUST00000173402 505 ntBASIC18.79■□□□□ 0.6
Krt40Q6IFX3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt40Q6IFX3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms