Protein–RNA interactions for Protein: Q64336

Tbr1, T-box brain protein 1, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tbr1Q64336 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tbr1Q64336 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tbr1Q64336 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tbr1Q64336 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tbr1Q64336 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tbr1Q64336 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Tbr1Q64336 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.38□□□□□ -0.11
Tbr1Q64336 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tbr1Q64336 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.38□□□□□ -0.11
Tbr1Q64336 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tbr1Q64336 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tbr1Q64336 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tbr1Q64336 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.38□□□□□ -0.11
Tbr1Q64336 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tbr1Q64336 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Tbr1Q64336 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tbr1Q64336 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tbr1Q64336 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tbr1Q64336 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tbr1Q64336 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tbr1Q64336 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tbr1Q64336 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tbr1Q64336 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.38□□□□□ -0.11
Tbr1Q64336 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tbr1Q64336 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tbr1Q64336 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tbr1Q64336 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tbr1Q64336 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tbr1Q64336 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tbr1Q64336 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tbr1Q64336 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.37□□□□□ -0.11
Tbr1Q64336 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tbr1Q64336 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tbr1Q64336 Gm8344-201ENSMUST00000119813 856 ntBASIC14.37□□□□□ -0.11
Tbr1Q64336 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tbr1Q64336 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tbr1Q64336 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tbr1Q64336 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tbr1Q64336 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.37□□□□□ -0.11
Tbr1Q64336 Gm5312-201ENSMUST00000203728 547 ntBASIC14.37□□□□□ -0.11
Tbr1Q64336 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tbr1Q64336 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tbr1Q64336 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tbr1Q64336 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tbr1Q64336 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.37□□□□□ -0.11
Tbr1Q64336 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tbr1Q64336 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tbr1Q64336 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Tbr1Q64336 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tbr1Q64336 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tbr1Q64336 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tbr1Q64336 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tbr1Q64336 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tbr1Q64336 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Tbr1Q64336 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.36□□□□□ -0.11
Tbr1Q64336 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tbr1Q64336 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.36□□□□□ -0.11
Tbr1Q64336 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.36□□□□□ -0.11
Tbr1Q64336 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tbr1Q64336 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tbr1Q64336 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tbr1Q64336 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tbr1Q64336 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tbr1Q64336 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.36□□□□□ -0.11
Tbr1Q64336 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tbr1Q64336 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tbr1Q64336 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tbr1Q64336 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tbr1Q64336 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tbr1Q64336 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Tbr1Q64336 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tbr1Q64336 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tbr1Q64336 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tbr1Q64336 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tbr1Q64336 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Tbr1Q64336 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tbr1Q64336 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tbr1Q64336 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tbr1Q64336 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tbr1Q64336 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.35□□□□□ -0.11
Tbr1Q64336 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.35□□□□□ -0.11
Tbr1Q64336 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tbr1Q64336 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tbr1Q64336 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tbr1Q64336 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Tbr1Q64336 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Tbr1Q64336 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Tbr1Q64336 Gm44335-201ENSMUST00000196879 141 ntBASIC14.35□□□□□ -0.11
Tbr1Q64336 Gm44297-201ENSMUST00000198304 141 ntBASIC14.35□□□□□ -0.11
Tbr1Q64336 Gm44346-201ENSMUST00000198851 141 ntBASIC14.35□□□□□ -0.11
Tbr1Q64336 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tbr1Q64336 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tbr1Q64336 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Tbr1Q64336 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.35□□□□□ -0.11
Tbr1Q64336 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Tbr1Q64336 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tbr1Q64336 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tbr1Q64336 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tbr1Q64336 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tbr1Q64336 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms