Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox17Q61473 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox17Q61473 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox17Q61473 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sox17Q61473 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sox17Q61473 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Sox17Q61473 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox17Q61473 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox17Q61473 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sox17Q61473 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.11■□□□□ 0.01
Sox17Q61473 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox17Q61473 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sox17Q61473 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sox17Q61473 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox17Q61473 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sox17Q61473 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox17Q61473 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox17Q61473 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.1■□□□□ 0.01
Sox17Q61473 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox17Q61473 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox17Q61473 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox17Q61473 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox17Q61473 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.1■□□□□ 0.01
Sox17Q61473 Gm10698-201ENSMUST00000182663 604 ntBASIC15.1■□□□□ 0.01
Sox17Q61473 Gm37856-201ENSMUST00000191634 999 ntBASIC15.1■□□□□ 0.01
Sox17Q61473 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox17Q61473 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Sox17Q61473 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox17Q61473 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox17Q61473 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Sox17Q61473 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox17Q61473 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Sox17Q61473 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox17Q61473 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox17Q61473 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox17Q61473 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox17Q61473 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox17Q61473 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox17Q61473 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox17Q61473 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox17Q61473 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Sox17Q61473 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.09■□□□□ 0.01
Sox17Q61473 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sox17Q61473 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.09■□□□□ 0.01
Sox17Q61473 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox17Q61473 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox17Q61473 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.09■□□□□ 0.01
Sox17Q61473 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox17Q61473 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox17Q61473 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox17Q61473 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sox17Q61473 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox17Q61473 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox17Q61473 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox17Q61473 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox17Q61473 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Sox17Q61473 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox17Q61473 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox17Q61473 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox17Q61473 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox17Q61473 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.09■□□□□ 0.01
Sox17Q61473 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox17Q61473 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sox17Q61473 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox17Q61473 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox17Q61473 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.09■□□□□ 0.01
Sox17Q61473 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox17Q61473 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox17Q61473 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sox17Q61473 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sox17Q61473 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sox17Q61473 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sox17Q61473 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox17Q61473 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox17Q61473 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.08■□□□□ 0
Sox17Q61473 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox17Q61473 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox17Q61473 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.08■□□□□ 0
Sox17Q61473 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox17Q61473 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.08■□□□□ 0
Sox17Q61473 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox17Q61473 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox17Q61473 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.08■□□□□ 0
Sox17Q61473 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox17Q61473 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox17Q61473 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.08■□□□□ 0
Sox17Q61473 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox17Q61473 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox17Q61473 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sox17Q61473 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.08■□□□□ 0
Sox17Q61473 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox17Q61473 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sox17Q61473 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.08■□□□□ 0
Sox17Q61473 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Sox17Q61473 BC037039-201ENSMUST00000192003 2205 ntBASIC15.08■□□□□ 0
Sox17Q61473 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.08■□□□□ 0
Sox17Q61473 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Sox17Q61473 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sox17Q61473 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sox17Q61473 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms