Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Clcn4Q61418 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Clcn4Q61418 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Clcn4Q61418 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Clcn4Q61418 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Clcn4Q61418 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Clcn4Q61418 Gm13186-201ENSMUST00000118031 316 ntBASIC14.81□□□□□ -0.04
Clcn4Q61418 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.81□□□□□ -0.04
Clcn4Q61418 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Clcn4Q61418 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Clcn4Q61418 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.8□□□□□ -0.04
Clcn4Q61418 Gm7213-201ENSMUST00000215977 950 ntBASIC14.8□□□□□ -0.04
Clcn4Q61418 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Clcn4Q61418 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.8□□□□□ -0.04
Clcn4Q61418 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Clcn4Q61418 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Clcn4Q61418 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Clcn4Q61418 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Clcn4Q61418 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Clcn4Q61418 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Clcn4Q61418 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clcn4Q61418 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Clcn4Q61418 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.79□□□□□ -0.04
Clcn4Q61418 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Clcn4Q61418 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Clcn4Q61418 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clcn4Q61418 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clcn4Q61418 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.79□□□□□ -0.04
Clcn4Q61418 Gm18115-201ENSMUST00000221209 621 ntBASIC14.79□□□□□ -0.04
Clcn4Q61418 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Clcn4Q61418 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clcn4Q61418 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clcn4Q61418 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Clcn4Q61418 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clcn4Q61418 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Clcn4Q61418 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clcn4Q61418 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clcn4Q61418 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Clcn4Q61418 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clcn4Q61418 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clcn4Q61418 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms