Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ift88Q61371 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ift88Q61371 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ift88Q61371 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ift88Q61371 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ift88Q61371 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.79■□□□□ 0.44
Ift88Q61371 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ift88Q61371 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.79■□□□□ 0.44
Ift88Q61371 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ift88Q61371 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ift88Q61371 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift88Q61371 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ift88Q61371 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift88Q61371 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift88Q61371 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ift88Q61371 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.78■□□□□ 0.44
Ift88Q61371 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.78■□□□□ 0.44
Ift88Q61371 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift88Q61371 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift88Q61371 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift88Q61371 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift88Q61371 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift88Q61371 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ift88Q61371 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift88Q61371 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift88Q61371 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift88Q61371 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift88Q61371 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift88Q61371 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift88Q61371 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Ift88Q61371 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ift88Q61371 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ift88Q61371 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ift88Q61371 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ift88Q61371 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ift88Q61371 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ift88Q61371 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ift88Q61371 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ift88Q61371 Mir1668-201ENSMUST00000184114 107 ntBASIC17.77■□□□□ 0.44
Ift88Q61371 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.77■□□□□ 0.44
Ift88Q61371 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.77■□□□□ 0.44
Ift88Q61371 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ift88Q61371 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ift88Q61371 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ift88Q61371 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ift88Q61371 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ift88Q61371 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ift88Q61371 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ift88Q61371 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ift88Q61371 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ift88Q61371 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ift88Q61371 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ift88Q61371 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift88Q61371 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ift88Q61371 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift88Q61371 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.76■□□□□ 0.43
Ift88Q61371 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ift88Q61371 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ift88Q61371 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift88Q61371 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift88Q61371 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ift88Q61371 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift88Q61371 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift88Q61371 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Ift88Q61371 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift88Q61371 Gm26039-201ENSMUST00000158152 144 ntBASIC17.76■□□□□ 0.43
Ift88Q61371 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.76■□□□□ 0.43
Ift88Q61371 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ift88Q61371 Gm37055-201ENSMUST00000191866 133 ntBASIC17.76■□□□□ 0.43
Ift88Q61371 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.76■□□□□ 0.43
Ift88Q61371 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.76■□□□□ 0.43
Ift88Q61371 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift88Q61371 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.76■□□□□ 0.43
Ift88Q61371 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift88Q61371 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ift88Q61371 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ift88Q61371 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.76■□□□□ 0.43
Ift88Q61371 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift88Q61371 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift88Q61371 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift88Q61371 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.76■□□□□ 0.43
Ift88Q61371 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift88Q61371 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift88Q61371 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift88Q61371 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift88Q61371 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ift88Q61371 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift88Q61371 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift88Q61371 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift88Q61371 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift88Q61371 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.75■□□□□ 0.43
Ift88Q61371 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.75■□□□□ 0.43
Ift88Q61371 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ift88Q61371 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift88Q61371 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ift88Q61371 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift88Q61371 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift88Q61371 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift88Q61371 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift88Q61371 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms