Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
BC051142Q3V0M8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
BC051142Q3V0M8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BC051142Q3V0M8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC051142Q3V0M8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC051142Q3V0M8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC051142Q3V0M8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
BC051142Q3V0M8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC051142Q3V0M8 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.17■□□□□ 0.34
BC051142Q3V0M8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC051142Q3V0M8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC051142Q3V0M8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BC051142Q3V0M8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC051142Q3V0M8 Gm9013-201ENSMUST00000132939 882 ntBASIC17.17■□□□□ 0.34
BC051142Q3V0M8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.17■□□□□ 0.34
BC051142Q3V0M8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BC051142Q3V0M8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.17■□□□□ 0.34
BC051142Q3V0M8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC051142Q3V0M8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC051142Q3V0M8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC051142Q3V0M8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC051142Q3V0M8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC051142Q3V0M8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC051142Q3V0M8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.17■□□□□ 0.34
BC051142Q3V0M8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC051142Q3V0M8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
BC051142Q3V0M8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BC051142Q3V0M8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BC051142Q3V0M8 App-207ENSMUST00000227737 2827 ntBASIC17.16■□□□□ 0.34
BC051142Q3V0M8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BC051142Q3V0M8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
BC051142Q3V0M8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BC051142Q3V0M8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BC051142Q3V0M8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
BC051142Q3V0M8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BC051142Q3V0M8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
BC051142Q3V0M8 Gm10052-201ENSMUST00000168019 960 ntBASIC17.16■□□□□ 0.34
BC051142Q3V0M8 Gm5587-201ENSMUST00000206270 674 ntBASIC17.16■□□□□ 0.34
BC051142Q3V0M8 Gm7729-201ENSMUST00000050143 801 ntBASIC17.16■□□□□ 0.34
BC051142Q3V0M8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BC051142Q3V0M8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
BC051142Q3V0M8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
BC051142Q3V0M8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BC051142Q3V0M8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
BC051142Q3V0M8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
BC051142Q3V0M8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.16■□□□□ 0.34
BC051142Q3V0M8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
BC051142Q3V0M8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BC051142Q3V0M8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
BC051142Q3V0M8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
BC051142Q3V0M8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
BC051142Q3V0M8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.34
BC051142Q3V0M8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
BC051142Q3V0M8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.14■□□□□ 0.33
BC051142Q3V0M8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
BC051142Q3V0M8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BC051142Q3V0M8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BC051142Q3V0M8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
BC051142Q3V0M8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BC051142Q3V0M8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BC051142Q3V0M8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
BC051142Q3V0M8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BC051142Q3V0M8 Gm13836-201ENSMUST00000121159 501 ntBASIC17.14■□□□□ 0.33
BC051142Q3V0M8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BC051142Q3V0M8 Gm23634-201ENSMUST00000175071 91 ntBASIC17.14■□□□□ 0.33
BC051142Q3V0M8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BC051142Q3V0M8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BC051142Q3V0M8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BC051142Q3V0M8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
BC051142Q3V0M8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BC051142Q3V0M8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BC051142Q3V0M8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BC051142Q3V0M8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
BC051142Q3V0M8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BC051142Q3V0M8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms