Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sf3b2Q3UJB0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Sf3b2Q3UJB0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sf3b2Q3UJB0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3b2Q3UJB0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3b2Q3UJB0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3b2Q3UJB0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3b2Q3UJB0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Sf3b2Q3UJB0 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC20.69■□□□□ 0.9
Sf3b2Q3UJB0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3b2Q3UJB0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Sf3b2Q3UJB0 Gpr146-202ENSMUST00000053120 1040 ntBASIC20.69■□□□□ 0.9
Sf3b2Q3UJB0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3b2Q3UJB0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Sf3b2Q3UJB0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Sf3b2Q3UJB0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3b2Q3UJB0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Sf3b2Q3UJB0 Gm38318-201ENSMUST00000195769 1706 ntBASIC20.69■□□□□ 0.9
Sf3b2Q3UJB0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3b2Q3UJB0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3b2Q3UJB0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3b2Q3UJB0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3b2Q3UJB0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3b2Q3UJB0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 H2-Pa-201ENSMUST00000182803 626 ntBASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 Gm20553-201ENSMUST00000204205 844 ntBASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 Gm13294-201ENSMUST00000121757 1330 ntBASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3b2Q3UJB0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC20.67■□□□□ 0.9
Sf3b2Q3UJB0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3b2Q3UJB0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3b2Q3UJB0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.67■□□□□ 0.9
Sf3b2Q3UJB0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3b2Q3UJB0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3b2Q3UJB0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3b2Q3UJB0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3b2Q3UJB0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC20.67■□□□□ 0.9
Sf3b2Q3UJB0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3b2Q3UJB0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3b2Q3UJB0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.67■□□□□ 0.9
Sf3b2Q3UJB0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3b2Q3UJB0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3b2Q3UJB0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Sf3b2Q3UJB0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3b2Q3UJB0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3b2Q3UJB0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3b2Q3UJB0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3b2Q3UJB0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3b2Q3UJB0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3b2Q3UJB0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC20.66■□□□□ 0.9
Sf3b2Q3UJB0 Gm10253-201ENSMUST00000194270 940 ntBASIC20.66■□□□□ 0.9
Sf3b2Q3UJB0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC20.66■□□□□ 0.9
Sf3b2Q3UJB0 Thap2-203ENSMUST00000218989 527 ntBASIC20.66■□□□□ 0.9
Sf3b2Q3UJB0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Sf3b2Q3UJB0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3b2Q3UJB0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
Sf3b2Q3UJB0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC20.66■□□□□ 0.9
Sf3b2Q3UJB0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3b2Q3UJB0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3b2Q3UJB0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3b2Q3UJB0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3b2Q3UJB0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3b2Q3UJB0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3b2Q3UJB0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3b2Q3UJB0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Sf3b2Q3UJB0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3b2Q3UJB0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3b2Q3UJB0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.65■□□□□ 0.9
Sf3b2Q3UJB0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3b2Q3UJB0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC20.65■□□□□ 0.9
Sf3b2Q3UJB0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3b2Q3UJB0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3b2Q3UJB0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Sf3b2Q3UJB0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3b2Q3UJB0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC20.65■□□□□ 0.9
Sf3b2Q3UJB0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3b2Q3UJB0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC20.65■□□□□ 0.9
Sf3b2Q3UJB0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3b2Q3UJB0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3b2Q3UJB0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3b2Q3UJB0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3b2Q3UJB0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3b2Q3UJB0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms