Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx27Q3UHD6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx27Q3UHD6 Gm7222-201ENSMUST00000117512 906 ntBASIC17.29■□□□□ 0.36
Snx27Q3UHD6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Snx27Q3UHD6 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.29■□□□□ 0.36
Snx27Q3UHD6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.29■□□□□ 0.36
Snx27Q3UHD6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx27Q3UHD6 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.29■□□□□ 0.36
Snx27Q3UHD6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx27Q3UHD6 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Snx27Q3UHD6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Snx27Q3UHD6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx27Q3UHD6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx27Q3UHD6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Snx27Q3UHD6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.29■□□□□ 0.36
Snx27Q3UHD6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.29■□□□□ 0.36
Snx27Q3UHD6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx27Q3UHD6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Gm15590-201ENSMUST00000078419 552 ntBASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx27Q3UHD6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx27Q3UHD6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx27Q3UHD6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx27Q3UHD6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Snx27Q3UHD6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Snx27Q3UHD6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx27Q3UHD6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Snx27Q3UHD6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx27Q3UHD6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx27Q3UHD6 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx27Q3UHD6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.27■□□□□ 0.36
Snx27Q3UHD6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx27Q3UHD6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx27Q3UHD6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx27Q3UHD6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Snx27Q3UHD6 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.27■□□□□ 0.36
Snx27Q3UHD6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx27Q3UHD6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Snx27Q3UHD6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Snx27Q3UHD6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx27Q3UHD6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx27Q3UHD6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx27Q3UHD6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx27Q3UHD6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx27Q3UHD6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx27Q3UHD6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx27Q3UHD6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx27Q3UHD6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Gm6257-201ENSMUST00000163864 910 ntBASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Gm5364-201ENSMUST00000216789 889 ntBASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms