Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col19a1Q0VF58 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col19a1Q0VF58 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col19a1Q0VF58 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col19a1Q0VF58 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col19a1Q0VF58 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col19a1Q0VF58 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col19a1Q0VF58 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col19a1Q0VF58 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.07■□□□□ 0.32
Col19a1Q0VF58 Gm24158-201ENSMUST00000175263 71 ntBASIC17.07■□□□□ 0.32
Col19a1Q0VF58 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col19a1Q0VF58 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col19a1Q0VF58 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col19a1Q0VF58 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col19a1Q0VF58 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Col19a1Q0VF58 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col19a1Q0VF58 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col19a1Q0VF58 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col19a1Q0VF58 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Gm38294-201ENSMUST00000192831 381 ntBASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col19a1Q0VF58 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col19a1Q0VF58 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col19a1Q0VF58 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.05■□□□□ 0.32
Col19a1Q0VF58 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Col19a1Q0VF58 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col19a1Q0VF58 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col19a1Q0VF58 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.05■□□□□ 0.32
Col19a1Q0VF58 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Col19a1Q0VF58 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col19a1Q0VF58 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.05■□□□□ 0.32
Col19a1Q0VF58 Gm7653-201ENSMUST00000214567 508 ntBASIC17.05■□□□□ 0.32
Col19a1Q0VF58 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.05■□□□□ 0.32
Col19a1Q0VF58 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col19a1Q0VF58 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col19a1Q0VF58 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col19a1Q0VF58 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col19a1Q0VF58 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col19a1Q0VF58 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col19a1Q0VF58 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col19a1Q0VF58 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col19a1Q0VF58 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col19a1Q0VF58 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.04■□□□□ 0.32
Col19a1Q0VF58 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col19a1Q0VF58 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col19a1Q0VF58 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col19a1Q0VF58 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Col19a1Q0VF58 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.04■□□□□ 0.32
Col19a1Q0VF58 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.04■□□□□ 0.32
Col19a1Q0VF58 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col19a1Q0VF58 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col19a1Q0VF58 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Col19a1Q0VF58 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col19a1Q0VF58 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col19a1Q0VF58 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col19a1Q0VF58 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Col19a1Q0VF58 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col19a1Q0VF58 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col19a1Q0VF58 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col19a1Q0VF58 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col19a1Q0VF58 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col19a1Q0VF58 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col19a1Q0VF58 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.03■□□□□ 0.32
Col19a1Q0VF58 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col19a1Q0VF58 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col19a1Q0VF58 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col19a1Q0VF58 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col19a1Q0VF58 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Col19a1Q0VF58 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col19a1Q0VF58 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.03■□□□□ 0.32
Col19a1Q0VF58 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Col19a1Q0VF58 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col19a1Q0VF58 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col19a1Q0VF58 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.02■□□□□ 0.32
Col19a1Q0VF58 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col19a1Q0VF58 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.02■□□□□ 0.32
Col19a1Q0VF58 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Col19a1Q0VF58 Gm27618-201ENSMUST00000183671 60 ntBASIC17.02■□□□□ 0.32
Col19a1Q0VF58 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.02■□□□□ 0.32
Col19a1Q0VF58 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms