Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Tnfrsf9P20334 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Tnfrsf9P20334 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.08□□□□□ -0.32
Tnfrsf9P20334 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf9P20334 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Phf7-203ENSMUST00000226565 1971 ntBASIC13.07□□□□□ -0.32
Tnfrsf9P20334 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Gm12644-201ENSMUST00000119935 606 ntBASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.06□□□□□ -0.32
Tnfrsf9P20334 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms