Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.24□□□□□ -0.29
Sdc1P18828 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Sdc1P18828 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC13.24□□□□□ -0.29
Sdc1P18828 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Sdc1P18828 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc1P18828 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc1P18828 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc1P18828 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.24□□□□□ -0.29
Sdc1P18828 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc1P18828 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc1P18828 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc1P18828 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.24□□□□□ -0.29
Sdc1P18828 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc1P18828 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc1P18828 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.24□□□□□ -0.29
Sdc1P18828 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc1P18828 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc1P18828 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc1P18828 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc1P18828 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc1P18828 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.23□□□□□ -0.29
Sdc1P18828 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.23□□□□□ -0.29
Sdc1P18828 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc1P18828 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Sdc1P18828 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc1P18828 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc1P18828 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc1P18828 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.23□□□□□ -0.29
Sdc1P18828 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.23□□□□□ -0.29
Sdc1P18828 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc1P18828 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc1P18828 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.23□□□□□ -0.29
Sdc1P18828 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.23□□□□□ -0.29
Sdc1P18828 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.23□□□□□ -0.29
Sdc1P18828 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc1P18828 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.23□□□□□ -0.29
Sdc1P18828 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc1P18828 Phf7-203ENSMUST00000226565 1971 ntBASIC13.23□□□□□ -0.29
Sdc1P18828 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc1P18828 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc1P18828 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Sdc1P18828 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc1P18828 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sdc1P18828 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc1P18828 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc1P18828 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Sdc1P18828 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Sdc1P18828 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc1P18828 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc1P18828 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc1P18828 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc1P18828 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc1P18828 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.22□□□□□ -0.29
Sdc1P18828 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc1P18828 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc1P18828 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc1P18828 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc1P18828 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc1P18828 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc1P18828 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc1P18828 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc1P18828 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Sdc1P18828 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Sdc1P18828 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc1P18828 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc1P18828 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc1P18828 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sdc1P18828 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Sdc1P18828 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sdc1P18828 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sdc1P18828 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sdc1P18828 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sdc1P18828 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sdc1P18828 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sdc1P18828 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.21□□□□□ -0.29
Sdc1P18828 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sdc1P18828 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sdc1P18828 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC13.21□□□□□ -0.29
Sdc1P18828 Gm44549-201ENSMUST00000208351 577 ntBASIC13.21□□□□□ -0.29
Sdc1P18828 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sdc1P18828 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sdc1P18828 Gm13241-201ENSMUST00000094493 780 ntBASIC13.21□□□□□ -0.29
Sdc1P18828 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sdc1P18828 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sdc1P18828 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sdc1P18828 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sdc1P18828 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sdc1P18828 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.21□□□□□ -0.29
Sdc1P18828 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Sdc1P18828 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sdc1P18828 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sdc1P18828 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sdc1P18828 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sdc1P18828 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sdc1P18828 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sdc1P18828 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sdc1P18828 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sdc1P18828 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sdc1P18828 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sdc1P18828 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms