Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Rps24-207ENSMUST00000224568 714 ntBASIC11.37□□□□□ -0.59
Hbb-b1P02088 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.36□□□□□ -0.59
Hbb-b1P02088 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC11.36□□□□□ -0.59
Hbb-b1P02088 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.36□□□□□ -0.59
Hbb-b1P02088 BC037039-201ENSMUST00000192003 2205 ntBASIC11.36□□□□□ -0.59
Hbb-b1P02088 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.36□□□□□ -0.59
Hbb-b1P02088 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hbb-b1P02088 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hbb-b1P02088 CT010444.2-201ENSMUST00000217877 1629 ntBASIC11.35□□□□□ -0.59
Hbb-b1P02088 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hbb-b1P02088 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Gm11643-201ENSMUST00000119578 864 ntBASIC11.35□□□□□ -0.59
Hbb-b1P02088 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC11.35□□□□□ -0.59
Hbb-b1P02088 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.35□□□□□ -0.59
Hbb-b1P02088 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Hbb-b1P02088 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hbb-b1P02088 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hbb-b1P02088 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hbb-b1P02088 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hbb-b1P02088 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hbb-b1P02088 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms