Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Gm8668-201ENSMUST00000120559 1447 ntBASIC11.38□□□□□ -0.59
Sh2d1aO88890 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Gm11336-201ENSMUST00000118168 334 ntBASIC11.38□□□□□ -0.59
Sh2d1aO88890 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Krtap5-1-202ENSMUST00000188274 742 ntBASIC11.38□□□□□ -0.59
Sh2d1aO88890 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Gm18115-201ENSMUST00000221209 621 ntBASIC11.38□□□□□ -0.59
Sh2d1aO88890 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh2d1aO88890 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.37□□□□□ -0.59
Sh2d1aO88890 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11.37□□□□□ -0.59
Sh2d1aO88890 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Gm26039-201ENSMUST00000158152 144 ntBASIC11.37□□□□□ -0.59
Sh2d1aO88890 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Gm18421-201ENSMUST00000204122 625 ntBASIC11.37□□□□□ -0.59
Sh2d1aO88890 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh2d1aO88890 Sybu-209ENSMUST00000228639 4113 ntBASIC11.37□□□□□ -0.59
Sh2d1aO88890 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms