Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pde6dO55057 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pde6dO55057 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6dO55057 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.7□□□□□ -0.38
Pde6dO55057 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.7□□□□□ -0.38
Pde6dO55057 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6dO55057 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6dO55057 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6dO55057 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
Pde6dO55057 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6dO55057 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Pde6dO55057 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.7□□□□□ -0.38
Pde6dO55057 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6dO55057 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pde6dO55057 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.7□□□□□ -0.38
Pde6dO55057 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.7□□□□□ -0.38
Pde6dO55057 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pde6dO55057 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.7□□□□□ -0.38
Pde6dO55057 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.7□□□□□ -0.38
Pde6dO55057 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6dO55057 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6dO55057 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6dO55057 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6dO55057 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pde6dO55057 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.69□□□□□ -0.38
Pde6dO55057 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Pde6dO55057 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.69□□□□□ -0.38
Pde6dO55057 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Pde6dO55057 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6dO55057 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6dO55057 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pde6dO55057 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6dO55057 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pde6dO55057 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6dO55057 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6dO55057 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6dO55057 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6dO55057 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pde6dO55057 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6dO55057 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.68□□□□□ -0.38
Pde6dO55057 AC099934.2-201ENSMUST00000196389 70 ntBASIC12.68□□□□□ -0.38
Pde6dO55057 AC156953.1-201ENSMUST00000196953 70 ntBASIC12.68□□□□□ -0.38
Pde6dO55057 AC157822.2-201ENSMUST00000200291 70 ntBASIC12.68□□□□□ -0.38
Pde6dO55057 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6dO55057 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6dO55057 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pde6dO55057 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.68□□□□□ -0.38
Pde6dO55057 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6dO55057 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6dO55057 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6dO55057 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.68□□□□□ -0.38
Pde6dO55057 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6dO55057 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6dO55057 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6dO55057 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.68□□□□□ -0.38
Pde6dO55057 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6dO55057 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6dO55057 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Pde6dO55057 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6dO55057 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6dO55057 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6dO55057 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6dO55057 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6dO55057 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6dO55057 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6dO55057 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6dO55057 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6dO55057 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6dO55057 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6dO55057 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6dO55057 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6dO55057 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms