Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.1■□□□□ 0.65
Smarce1O54941 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarce1O54941 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Smarce1O54941 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarce1O54941 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarce1O54941 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarce1O54941 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarce1O54941 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarce1O54941 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarce1O54941 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarce1O54941 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarce1O54941 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarce1O54941 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarce1O54941 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smarce1O54941 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarce1O54941 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarce1O54941 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smarce1O54941 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.09■□□□□ 0.65
Smarce1O54941 Gm13559-201ENSMUST00000120476 863 ntBASIC19.09■□□□□ 0.65
Smarce1O54941 Mir5130-201ENSMUST00000175160 84 ntBASIC19.09■□□□□ 0.65
Smarce1O54941 Gm27011-201ENSMUST00000182352 972 ntBASIC19.09■□□□□ 0.65
Smarce1O54941 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.09■□□□□ 0.65
Smarce1O54941 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarce1O54941 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarce1O54941 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarce1O54941 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Smarce1O54941 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarce1O54941 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.09■□□□□ 0.65
Smarce1O54941 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Smarce1O54941 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarce1O54941 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Smarce1O54941 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Smarce1O54941 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smarce1O54941 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Smarce1O54941 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smarce1O54941 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smarce1O54941 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smarce1O54941 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarce1O54941 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarce1O54941 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarce1O54941 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Smarce1O54941 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.08■□□□□ 0.64
Smarce1O54941 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.08■□□□□ 0.64
Smarce1O54941 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Smarce1O54941 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarce1O54941 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarce1O54941 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Smarce1O54941 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Smarce1O54941 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarce1O54941 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarce1O54941 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Smarce1O54941 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarce1O54941 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarce1O54941 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarce1O54941 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarce1O54941 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarce1O54941 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarce1O54941 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarce1O54941 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smarce1O54941 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Smarce1O54941 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarce1O54941 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Smarce1O54941 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.07■□□□□ 0.64
Smarce1O54941 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.07■□□□□ 0.64
Smarce1O54941 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarce1O54941 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarce1O54941 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
Smarce1O54941 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smarce1O54941 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smarce1O54941 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Smarce1O54941 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.06■□□□□ 0.64
Smarce1O54941 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.06■□□□□ 0.64
Smarce1O54941 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
Smarce1O54941 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.06■□□□□ 0.64
Smarce1O54941 Gm45058-201ENSMUST00000205810 766 ntBASIC19.06■□□□□ 0.64
Smarce1O54941 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Smarce1O54941 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Smarce1O54941 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.06■□□□□ 0.64
Smarce1O54941 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms