Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Gm15039-201ENSMUST00000118914 875 ntBASIC12.56□□□□□ -0.4
Tnfsf11O35235 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Gm9731-201ENSMUST00000209480 747 ntBASIC12.56□□□□□ -0.4
Tnfsf11O35235 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfsf11O35235 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.55□□□□□ -0.4
Tnfsf11O35235 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfsf11O35235 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfsf11O35235 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Tnfsf11O35235 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms