Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube3aO08759 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube3aO08759 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ube3aO08759 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ube3aO08759 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ube3aO08759 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.37■□□□□ 0.37
Ube3aO08759 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.37■□□□□ 0.37
Ube3aO08759 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.37■□□□□ 0.37
Ube3aO08759 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube3aO08759 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ube3aO08759 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Ube3aO08759 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.37■□□□□ 0.37
Ube3aO08759 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube3aO08759 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube3aO08759 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.37■□□□□ 0.37
Ube3aO08759 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ube3aO08759 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.37■□□□□ 0.37
Ube3aO08759 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube3aO08759 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube3aO08759 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube3aO08759 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube3aO08759 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube3aO08759 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ube3aO08759 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ube3aO08759 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.36■□□□□ 0.37
Ube3aO08759 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ube3aO08759 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ube3aO08759 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ube3aO08759 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ube3aO08759 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Ube3aO08759 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
Ube3aO08759 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ube3aO08759 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ube3aO08759 Gm36967-201ENSMUST00000193814 266 ntBASIC17.36■□□□□ 0.37
Ube3aO08759 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.36■□□□□ 0.37
Ube3aO08759 Odf3b-204ENSMUST00000227834 930 ntBASIC17.36■□□□□ 0.37
Ube3aO08759 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ube3aO08759 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ube3aO08759 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ube3aO08759 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ube3aO08759 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ube3aO08759 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ube3aO08759 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ube3aO08759 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ube3aO08759 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ube3aO08759 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3aO08759 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3aO08759 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ube3aO08759 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3aO08759 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.35■□□□□ 0.37
Ube3aO08759 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ube3aO08759 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ube3aO08759 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3aO08759 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3aO08759 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.35■□□□□ 0.37
Ube3aO08759 Mir5122-201ENSMUST00000175004 89 ntBASIC17.35■□□□□ 0.37
Ube3aO08759 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Ube3aO08759 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ube3aO08759 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3aO08759 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3aO08759 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3aO08759 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3aO08759 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3aO08759 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3aO08759 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3aO08759 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3aO08759 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3aO08759 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3aO08759 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3aO08759 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ube3aO08759 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3aO08759 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3aO08759 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3aO08759 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3aO08759 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3aO08759 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3aO08759 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ube3aO08759 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3aO08759 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Ube3aO08759 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3aO08759 Gm44450-201ENSMUST00000199528 114 ntBASIC17.34■□□□□ 0.37
Ube3aO08759 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3aO08759 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.34■□□□□ 0.37
Ube3aO08759 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3aO08759 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3aO08759 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.34■□□□□ 0.37
Ube3aO08759 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3aO08759 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3aO08759 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3aO08759 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3aO08759 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3aO08759 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3aO08759 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3aO08759 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3aO08759 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ube3aO08759 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.34■□□□□ 0.37
Ube3aO08759 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3aO08759 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3aO08759 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.34■□□□□ 0.37
Ube3aO08759 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms