Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim34bJ3QNR8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim34bJ3QNR8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
Trim34bJ3QNR8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trim34bJ3QNR8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.58■□□□□ 0.73
Trim34bJ3QNR8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.58■□□□□ 0.73
Trim34bJ3QNR8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim34bJ3QNR8 Gm13216-201ENSMUST00000117145 591 ntBASIC19.58■□□□□ 0.72
Trim34bJ3QNR8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.58■□□□□ 0.72
Trim34bJ3QNR8 Gm27646-201ENSMUST00000183989 110 ntBASIC19.58■□□□□ 0.72
Trim34bJ3QNR8 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.58■□□□□ 0.72
Trim34bJ3QNR8 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.58■□□□□ 0.72
Trim34bJ3QNR8 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.58■□□□□ 0.72
Trim34bJ3QNR8 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.58■□□□□ 0.72
Trim34bJ3QNR8 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.58■□□□□ 0.72
Trim34bJ3QNR8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim34bJ3QNR8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Trim34bJ3QNR8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim34bJ3QNR8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim34bJ3QNR8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim34bJ3QNR8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim34bJ3QNR8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim34bJ3QNR8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim34bJ3QNR8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim34bJ3QNR8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Gm11779-201ENSMUST00000118541 368 ntBASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim34bJ3QNR8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 Gm14140-201ENSMUST00000119999 995 ntBASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 Gm5264-201ENSMUST00000190584 848 ntBASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim34bJ3QNR8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim34bJ3QNR8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
Trim34bJ3QNR8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim34bJ3QNR8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim34bJ3QNR8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim34bJ3QNR8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim34bJ3QNR8 Gm15467-201ENSMUST00000120582 445 ntBASIC19.55■□□□□ 0.72
Trim34bJ3QNR8 Gm11594-201ENSMUST00000122313 162 ntBASIC19.55■□□□□ 0.72
Trim34bJ3QNR8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim34bJ3QNR8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim34bJ3QNR8 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim34bJ3QNR8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Trim34bJ3QNR8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim34bJ3QNR8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim34bJ3QNR8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Trim34bJ3QNR8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim34bJ3QNR8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trim34bJ3QNR8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim34bJ3QNR8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Trim34bJ3QNR8 Gm12260-201ENSMUST00000122447 411 ntBASIC19.54■□□□□ 0.72
Trim34bJ3QNR8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trim34bJ3QNR8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.54■□□□□ 0.72
Trim34bJ3QNR8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim34bJ3QNR8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim34bJ3QNR8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim34bJ3QNR8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim34bJ3QNR8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms