Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shank1D3YZU1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.33□□□□□ -0.12
Shank1D3YZU1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shank1D3YZU1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shank1D3YZU1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shank1D3YZU1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shank1D3YZU1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.33□□□□□ -0.12
Shank1D3YZU1 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.33□□□□□ -0.12
Shank1D3YZU1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shank1D3YZU1 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shank1D3YZU1 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Shank1D3YZU1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shank1D3YZU1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shank1D3YZU1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shank1D3YZU1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.32□□□□□ -0.12
Shank1D3YZU1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Gm27494-201ENSMUST00000184735 189 ntBASIC14.32□□□□□ -0.12
Shank1D3YZU1 Gm5312-201ENSMUST00000203728 547 ntBASIC14.32□□□□□ -0.12
Shank1D3YZU1 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.32□□□□□ -0.12
Shank1D3YZU1 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shank1D3YZU1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Shank1D3YZU1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Shank1D3YZU1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shank1D3YZU1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shank1D3YZU1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shank1D3YZU1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shank1D3YZU1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shank1D3YZU1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shank1D3YZU1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shank1D3YZU1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shank1D3YZU1 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shank1D3YZU1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shank1D3YZU1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shank1D3YZU1 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shank1D3YZU1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shank1D3YZU1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shank1D3YZU1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shank1D3YZU1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Shank1D3YZU1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shank1D3YZU1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shank1D3YZU1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.3□□□□□ -0.12
Shank1D3YZU1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.3□□□□□ -0.12
Shank1D3YZU1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.3□□□□□ -0.12
Shank1D3YZU1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Gm13616-201ENSMUST00000120600 222 ntBASIC14.3□□□□□ -0.12
Shank1D3YZU1 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Shank1D3YZU1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shank1D3YZU1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shank1D3YZU1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms