Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-1A0A0G2JEU8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Gm17971-201ENSMUST00000190239 806 ntBASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Gm44450-201ENSMUST00000199528 114 ntBASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms