Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gm18284-201ENSMUST00000172604 624 ntBASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gm9731-201ENSMUST00000209480 747 ntBASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gm36967-201ENSMUST00000193814 266 ntBASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gm4968-201ENSMUST00000071458 858 ntBASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms