Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm43799-201ENSMUST00000201845 579 ntBASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Gm18421-201ENSMUST00000204122 625 ntBASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Gm18959-201ENSMUST00000208954 655 ntBASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav5-4A0A075B652 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Gm26039-201ENSMUST00000158152 144 ntBASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Mir1668-201ENSMUST00000184114 107 ntBASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Gm45058-201ENSMUST00000205810 766 ntBASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-4A0A075B652 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Gm15565-201ENSMUST00000118890 427 ntBASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms