Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Gm20760-201ENSMUST00000179197 648 ntBASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4-4-dv10A0A075B651 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4-4-dv10A0A075B651 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4-4-dv10A0A075B651 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trav4-4-dv10A0A075B651 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4-4-dv10A0A075B651 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4-4-dv10A0A075B651 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Gm21814-202ENSMUST00000203277 873 ntBASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Trav4-4-dv10A0A075B651 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Gm715-201ENSMUST00000117865 831 ntBASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Gm13474-201ENSMUST00000122466 815 ntBASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 App-207ENSMUST00000227737 2827 ntBASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-4-dv10A0A075B651 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav4-4-dv10A0A075B651 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-4-dv10A0A075B651 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-4-dv10A0A075B651 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav4-4-dv10A0A075B651 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-4-dv10A0A075B651 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-4-dv10A0A075B651 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-4-dv10A0A075B651 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-4-dv10A0A075B651 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-4-dv10A0A075B651 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-4-dv10A0A075B651 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav4-4-dv10A0A075B651 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav4-4-dv10A0A075B651 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-4-dv10A0A075B651 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Trav4-4-dv10A0A075B651 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms