Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Gm17271-201ENSMUST00000165535 355 ntBASIC14.67□□□□□ -0.06
Trav8n-2A0A075B633 Gm37153-201ENSMUST00000193637 231 ntBASIC14.67□□□□□ -0.06
Trav8n-2A0A075B633 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav8n-2A0A075B633 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8n-2A0A075B633 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8n-2A0A075B633 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8n-2A0A075B633 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8n-2A0A075B633 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8n-2A0A075B633 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav8n-2A0A075B633 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Gm5682-201ENSMUST00000173402 505 ntBASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8n-2A0A075B633 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8n-2A0A075B633 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav8n-2A0A075B633 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav8n-2A0A075B633 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8n-2A0A075B633 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8n-2A0A075B633 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8n-2A0A075B633 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8n-2A0A075B633 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav8n-2A0A075B633 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav8n-2A0A075B633 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8n-2A0A075B633 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.64□□□□□ -0.07
Trav8n-2A0A075B633 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8n-2A0A075B633 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav8n-2A0A075B633 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8n-2A0A075B633 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav8n-2A0A075B633 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8n-2A0A075B633 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8n-2A0A075B633 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8n-2A0A075B633 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8n-2A0A075B633 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8n-2A0A075B633 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8n-2A0A075B633 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8n-2A0A075B633 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8n-2A0A075B633 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms