Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Gm7461-201ENSMUST00000058918 827 ntBASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-1A0A075B606 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Gm24589-201ENSMUST00000116692 94 ntBASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13d-1A0A075B606 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Trav13d-1A0A075B606 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Trav13d-1A0A075B606 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13d-1A0A075B606 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms