Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC244015.1-201ENST00000622301 99 ntBASIC2.19□□□□□ -2.06
PCDHA3Q9Y5H8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PCDHA3Q9Y5H8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
PCDHA3Q9Y5H8 AC008555.8-201ENST00000623602 2168 ntBASIC2.18□□□□□ -2.06
PCDHA3Q9Y5H8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.18□□□□□ -2.06
PCDHA3Q9Y5H8 MIR367-201ENST00000362299 68 ntBASIC2.18□□□□□ -2.06
PCDHA3Q9Y5H8 RNU4-17P-201ENST00000365598 141 ntBASIC2.18□□□□□ -2.06
PCDHA3Q9Y5H8 Y_RNA.435-201ENST00000384095 112 ntBASIC2.18□□□□□ -2.06
PCDHA3Q9Y5H8 SNORA70B-201ENST00000384210 135 ntBASIC2.18□□□□□ -2.06
PCDHA3Q9Y5H8 RNA5SP109-201ENST00000391010 116 ntBASIC2.18□□□□□ -2.06
PCDHA3Q9Y5H8 RNA5SP100-201ENST00000410903 110 ntBASIC2.18□□□□□ -2.06
PCDHA3Q9Y5H8 RNA5SP59-201ENST00000410922 110 ntBASIC2.18□□□□□ -2.06
PCDHA3Q9Y5H8 AC245047.3-201ENST00000429428 127 ntBASIC2.18□□□□□ -2.06
PCDHA3Q9Y5H8 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.18□□□□□ -2.06
PCDHA3Q9Y5H8 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.18□□□□□ -2.06
PCDHA3Q9Y5H8 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.18□□□□□ -2.06
PCDHA3Q9Y5H8 MIR8054-201ENST00000620877 86 ntBASIC2.18□□□□□ -2.06
PCDHA3Q9Y5H8 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.18□□□□□ -2.06
PCDHA3Q9Y5H8 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.18□□□□□ -2.06
PCDHA3Q9Y5H8 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PCDHA3Q9Y5H8 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PCDHA3Q9Y5H8 Y_RNA.24-201ENST00000362508 103 ntBASIC2.17□□□□□ -2.06
PCDHA3Q9Y5H8 SNORA1B-201ENST00000362535 133 ntBASIC2.17□□□□□ -2.06
PCDHA3Q9Y5H8 RNU6-950P-201ENST00000384651 107 ntBASIC2.17□□□□□ -2.06
PCDHA3Q9Y5H8 RNU6-918P-201ENST00000391219 106 ntBASIC2.17□□□□□ -2.06
PCDHA3Q9Y5H8 RNA5SP496-201ENST00000391240 109 ntBASIC2.17□□□□□ -2.06
PCDHA3Q9Y5H8 RNU6-383P-201ENST00000410864 94 ntBASIC2.17□□□□□ -2.06
PCDHA3Q9Y5H8 AL049830.1-201ENST00000468034 425 ntBASIC2.17□□□□□ -2.06
PCDHA3Q9Y5H8 RNU7-28P-201ENST00000516759 62 ntBASIC2.17□□□□□ -2.06
PCDHA3Q9Y5H8 RNU6-182P-201ENST00000516970 105 ntBASIC2.17□□□□□ -2.06
PCDHA3Q9Y5H8 MIR4308-201ENST00000580634 81 ntBASIC2.17□□□□□ -2.06
PCDHA3Q9Y5H8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PCDHA3Q9Y5H8 ZNF702P-202ENST00000434269 1966 ntBASIC2.16□□□□□ -2.06
PCDHA3Q9Y5H8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
PCDHA3Q9Y5H8 U8.2-201ENST00000363156 134 ntBASIC2.16□□□□□ -2.06
PCDHA3Q9Y5H8 RNU6-1020P-201ENST00000363684 107 ntBASIC2.16□□□□□ -2.06
PCDHA3Q9Y5H8 RNU4-10P-201ENST00000364383 140 ntBASIC2.16□□□□□ -2.06
PCDHA3Q9Y5H8 SNORA16B-201ENST00000364674 135 ntBASIC2.16□□□□□ -2.06
PCDHA3Q9Y5H8 RNU6-969P-201ENST00000383900 105 ntBASIC2.16□□□□□ -2.06
PCDHA3Q9Y5H8 RNU6-1080P-201ENST00000383982 107 ntBASIC2.16□□□□□ -2.06
PCDHA3Q9Y5H8 RNU6-440P-201ENST00000390882 105 ntBASIC2.16□□□□□ -2.06
PCDHA3Q9Y5H8 RNU6-381P-201ENST00000391259 108 ntBASIC2.16□□□□□ -2.06
PCDHA3Q9Y5H8 AL512604.1-201ENST00000404812 257 ntBASIC2.16□□□□□ -2.06
PCDHA3Q9Y5H8 RNA5SP425-201ENST00000410336 112 ntBASIC2.16□□□□□ -2.06
PCDHA3Q9Y5H8 Y_RNA.621-201ENST00000411065 96 ntBASIC2.16□□□□□ -2.06
PCDHA3Q9Y5H8 Y_RNA.793-201ENST00000411222 111 ntBASIC2.16□□□□□ -2.06
PCDHA3Q9Y5H8 COX6CP10-201ENST00000416832 224 ntBASIC2.16□□□□□ -2.06
PCDHA3Q9Y5H8 AL158823.1-201ENST00000418441 478 ntBASIC2.16□□□□□ -2.06
PCDHA3Q9Y5H8 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.16□□□□□ -2.06
PCDHA3Q9Y5H8 MIR514B-201ENST00000516774 80 ntBASIC2.16□□□□□ -2.06
PCDHA3Q9Y5H8 AC002984.1-201ENST00000591692 448 ntBASIC2.16□□□□□ -2.06
PCDHA3Q9Y5H8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
PCDHA3Q9Y5H8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
PCDHA3Q9Y5H8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
PCDHA3Q9Y5H8 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PCDHA3Q9Y5H8 Y_RNA.121-201ENST00000363309 113 ntBASIC2.15□□□□□ -2.07
PCDHA3Q9Y5H8 RNU6-923P-201ENST00000364753 107 ntBASIC2.15□□□□□ -2.07
PCDHA3Q9Y5H8 RNA5SP212-201ENST00000391223 107 ntBASIC2.15□□□□□ -2.07
PCDHA3Q9Y5H8 RNU6-493P-201ENST00000391321 108 ntBASIC2.15□□□□□ -2.07
PCDHA3Q9Y5H8 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.15□□□□□ -2.07
PCDHA3Q9Y5H8 MIR1278-201ENST00000408753 81 ntBASIC2.15□□□□□ -2.07
PCDHA3Q9Y5H8 RN7SKP192-201ENST00000411291 327 ntBASIC2.15□□□□□ -2.07
PCDHA3Q9Y5H8 HMGN2P38-201ENST00000423806 265 ntBASIC2.15□□□□□ -2.07
PCDHA3Q9Y5H8 AL356320.1-201ENST00000429616 163 ntBASIC2.15□□□□□ -2.07
PCDHA3Q9Y5H8 MTND5P15-201ENST00000434246 349 ntBASIC2.15□□□□□ -2.07
PCDHA3Q9Y5H8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.15□□□□□ -2.07
PCDHA3Q9Y5H8 RPS27P21-201ENST00000486977 252 ntBASIC2.15□□□□□ -2.07
PCDHA3Q9Y5H8 HMGN1P7-201ENST00000491722 313 ntBASIC2.15□□□□□ -2.07
PCDHA3Q9Y5H8 RN7SKP164-201ENST00000516138 266 ntBASIC2.15□□□□□ -2.07
PCDHA3Q9Y5H8 RNA5SP481-201ENST00000516814 122 ntBASIC2.15□□□□□ -2.07
PCDHA3Q9Y5H8 RNU2-56P-201ENST00000516826 190 ntBASIC2.15□□□□□ -2.07
PCDHA3Q9Y5H8 AC004792.1-201ENST00000614523 137 ntBASIC2.15□□□□□ -2.07
PCDHA3Q9Y5H8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PCDHA3Q9Y5H8 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 Y_RNA.7-201ENST00000362352 102 ntBASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 RNU6-1209P-201ENST00000363655 107 ntBASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 RNU6-103P-201ENST00000363686 107 ntBASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 Y_RNA.796-201ENST00000364268 102 ntBASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 snoU2_19.4-201ENST00000364329 80 ntBASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 RNU4-41P-201ENST00000364426 143 ntBASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 Y_RNA.799-201ENST00000364992 102 ntBASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 Y_RNA.572-201ENST00000384757 98 ntBASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 MIR616-201ENST00000385293 97 ntBASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 RNA5SP482-201ENST00000391269 118 ntBASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 SNORA3.2-201ENST00000408221 125 ntBASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 RNU2-7P-201ENST00000410794 178 ntBASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 RN7SKP101-201ENST00000411376 320 ntBASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 AC009310.1-201ENST00000414414 451 ntBASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 Z98742.3-201ENST00000418637 326 ntBASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 RNU7-120P-201ENST00000459334 63 ntBASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 SNORA31.10-201ENST00000516482 106 ntBASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 RNA5SP437-201ENST00000517249 129 ntBASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 IGKV3-31-201ENST00000523109 329 ntBASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 AC072026.1-201ENST00000605023 201 ntBASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 AL021707.8-201ENST00000609428 183 ntBASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PCDHA3Q9Y5H8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
PCDHA3Q9Y5H8 Y_RNA.229-201ENST00000364347 113 ntBASIC2.13□□□□□ -2.07
PCDHA3Q9Y5H8 Y_RNA.253-201ENST00000364562 112 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 189.8 ms