Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 SNORD115-43-201ENST00000365503 82 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 SNORD115-36-201ENST00000365629 82 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 Y_RNA.565-201ENST00000384719 101 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 MIR515-2-201ENST00000384883 83 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 MIR515-1-201ENST00000384884 83 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 FO393413.1-201ENST00000402892 195 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 AC090844.1-201ENST00000422019 156 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 RNU1-95P-201ENST00000516357 160 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 RNU1-128P-201ENST00000516704 160 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 MIR4712-201ENST00000583750 82 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHB3Q9Y5E6 CEP170P1-201ENST00000502249 4587 ntBASIC3.7□□□□□ -1.82
PCDHB3Q9Y5E6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHB3Q9Y5E6 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDHB3Q9Y5E6 MIR208A-201ENST00000362287 71 ntBASIC3.7□□□□□ -1.82
PCDHB3Q9Y5E6 RNA5SP124-201ENST00000362739 110 ntBASIC3.7□□□□□ -1.82
PCDHB3Q9Y5E6 RNU6-525P-201ENST00000363685 104 ntBASIC3.7□□□□□ -1.82
PCDHB3Q9Y5E6 RNU2-63P-201ENST00000410792 194 ntBASIC3.7□□□□□ -1.82
PCDHB3Q9Y5E6 PRSS3P4-201ENST00000453323 162 ntBASIC3.7□□□□□ -1.82
PCDHB3Q9Y5E6 RNA5SP164-201ENST00000516533 110 ntBASIC3.7□□□□□ -1.82
PCDHB3Q9Y5E6 RNA5SP33-201ENST00000516687 98 ntBASIC3.7□□□□□ -1.82
PCDHB3Q9Y5E6 RNU6-711P-201ENST00000517255 106 ntBASIC3.7□□□□□ -1.82
PCDHB3Q9Y5E6 AC026403.1-201ENST00000518938 295 ntBASIC3.7□□□□□ -1.82
PCDHB3Q9Y5E6 AC087499.8-201ENST00000578406 226 ntBASIC3.7□□□□□ -1.82
PCDHB3Q9Y5E6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDHB3Q9Y5E6 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDHB3Q9Y5E6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHB3Q9Y5E6 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHB3Q9Y5E6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.7□□□□□ -1.82
PCDHB3Q9Y5E6 MFSD8-233ENST00000641482 4860 ntBASIC3.7□□□□□ -1.82
PCDHB3Q9Y5E6 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHB3Q9Y5E6 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHB3Q9Y5E6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHB3Q9Y5E6 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.69□□□□□ -1.82
PCDHB3Q9Y5E6 SNORA25.6-201ENST00000364121 118 ntBASIC3.69□□□□□ -1.82
PCDHB3Q9Y5E6 RNU6-1229P-201ENST00000364295 107 ntBASIC3.69□□□□□ -1.82
PCDHB3Q9Y5E6 MIR199A2-201ENST00000385289 110 ntBASIC3.69□□□□□ -1.82
PCDHB3Q9Y5E6 Y_RNA.609-201ENST00000410669 89 ntBASIC3.69□□□□□ -1.82
PCDHB3Q9Y5E6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.69□□□□□ -1.82
PCDHB3Q9Y5E6 TRIAP1P1-201ENST00000427062 225 ntBASIC3.69□□□□□ -1.82
PCDHB3Q9Y5E6 ARF4P2-201ENST00000430209 526 ntBASIC3.69□□□□□ -1.82
PCDHB3Q9Y5E6 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.69□□□□□ -1.82
PCDHB3Q9Y5E6 TRBV12-2-201ENST00000489763 344 ntBASIC3.69□□□□□ -1.82
PCDHB3Q9Y5E6 RN7SKP83-201ENST00000516512 178 ntBASIC3.69□□□□□ -1.82
PCDHB3Q9Y5E6 MIR3199-1-201ENST00000582434 88 ntBASIC3.69□□□□□ -1.82
PCDHB3Q9Y5E6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDHB3Q9Y5E6 MIR7157-201ENST00000635801 60 ntBASIC3.69□□□□□ -1.82
PCDHB3Q9Y5E6 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.69□□□□□ -1.82
PCDHB3Q9Y5E6 AC009093.8-201ENST00000641769 292 ntBASIC3.69□□□□□ -1.82
PCDHB3Q9Y5E6 TNPO1P3-201ENST00000436471 2662 ntBASIC3.69□□□□□ -1.82
PCDHB3Q9Y5E6 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHB3Q9Y5E6 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHB3Q9Y5E6 Y_RNA.247-201ENST00000364500 92 ntBASIC3.68□□□□□ -1.82
PCDHB3Q9Y5E6 SNORA73.2-201ENST00000364946 201 ntBASIC3.68□□□□□ -1.82
PCDHB3Q9Y5E6 RNU6-1319P-201ENST00000390855 104 ntBASIC3.68□□□□□ -1.82
PCDHB3Q9Y5E6 RNU6-747P-201ENST00000390928 104 ntBASIC3.68□□□□□ -1.82
PCDHB3Q9Y5E6 RNU6-241P-201ENST00000391148 104 ntBASIC3.68□□□□□ -1.82
PCDHB3Q9Y5E6 RNU6-177P-201ENST00000411257 104 ntBASIC3.68□□□□□ -1.82
PCDHB3Q9Y5E6 Z92545.1-201ENST00000411782 234 ntBASIC3.68□□□□□ -1.82
PCDHB3Q9Y5E6 ATP5J2P3-201ENST00000451550 258 ntBASIC3.68□□□□□ -1.82
PCDHB3Q9Y5E6 RN7SL504P-201ENST00000494496 287 ntBASIC3.68□□□□□ -1.82
PCDHB3Q9Y5E6 AC114811.1-201ENST00000507207 168 ntBASIC3.68□□□□□ -1.82
PCDHB3Q9Y5E6 SNORD59.2-201ENST00000516873 68 ntBASIC3.68□□□□□ -1.82
PCDHB3Q9Y5E6 SNORA48.11-201ENST00000517015 89 ntBASIC3.68□□□□□ -1.82
PCDHB3Q9Y5E6 RNU6-86P-201ENST00000606534 107 ntBASIC3.68□□□□□ -1.82
PCDHB3Q9Y5E6 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
PCDHB3Q9Y5E6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHB3Q9Y5E6 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.68□□□□□ -1.82
PCDHB3Q9Y5E6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHB3Q9Y5E6 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHB3Q9Y5E6 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.68□□□□□ -1.82
PCDHB3Q9Y5E6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB3Q9Y5E6 SNORA5A-201ENST00000384111 134 ntBASIC3.67□□□□□ -1.82
PCDHB3Q9Y5E6 SRIP3-201ENST00000413200 219 ntBASIC3.67□□□□□ -1.82
PCDHB3Q9Y5E6 CYP2C59P-201ENST00000457790 269 ntBASIC3.67□□□□□ -1.82
PCDHB3Q9Y5E6 CKS1BP2-201ENST00000497342 240 ntBASIC3.67□□□□□ -1.82
PCDHB3Q9Y5E6 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDHB3Q9Y5E6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.67□□□□□ -1.82
PCDHB3Q9Y5E6 AC103810.6-201ENST00000606708 136 ntBASIC3.67□□□□□ -1.82
PCDHB3Q9Y5E6 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB3Q9Y5E6 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
PCDHB3Q9Y5E6 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHB3Q9Y5E6 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDHB3Q9Y5E6 SNORA22.1-201ENST00000362701 134 ntBASIC3.66□□□□□ -1.82
PCDHB3Q9Y5E6 RNA5SP72-201ENST00000364442 117 ntBASIC3.66□□□□□ -1.82
PCDHB3Q9Y5E6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PCDHB3Q9Y5E6 RPS29P4-201ENST00000414733 161 ntBASIC3.66□□□□□ -1.82
PCDHB3Q9Y5E6 RPS12P2-201ENST00000439728 269 ntBASIC3.66□□□□□ -1.82
PCDHB3Q9Y5E6 RN7SL636P-201ENST00000497504 294 ntBASIC3.66□□□□□ -1.82
PCDHB3Q9Y5E6 RPPH1-2P-201ENST00000516688 293 ntBASIC3.66□□□□□ -1.82
PCDHB3Q9Y5E6 RNU7-28P-201ENST00000516759 62 ntBASIC3.66□□□□□ -1.82
PCDHB3Q9Y5E6 SCARNA14-201ENST00000516903 136 ntBASIC3.66□□□□□ -1.82
PCDHB3Q9Y5E6 IGLV3-17-201ENST00000519099 244 ntBASIC3.66□□□□□ -1.82
PCDHB3Q9Y5E6 MIR5047-201ENST00000579212 100 ntBASIC3.66□□□□□ -1.82
PCDHB3Q9Y5E6 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms