Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RNU6-81P-201ENST00000365608 104 ntBASIC2.63□□□□□ -1.99
CTDP1Q9Y5B0 RNU6-376P-201ENST00000384731 106 ntBASIC2.63□□□□□ -1.99
CTDP1Q9Y5B0 MIR15B-201ENST00000385045 98 ntBASIC2.63□□□□□ -1.99
CTDP1Q9Y5B0 MIR561-201ENST00000385216 97 ntBASIC2.63□□□□□ -1.99
CTDP1Q9Y5B0 MIR1253-201ENST00000408273 105 ntBASIC2.63□□□□□ -1.99
CTDP1Q9Y5B0 AL162725.1-201ENST00000435405 301 ntBASIC2.63□□□□□ -1.99
CTDP1Q9Y5B0 AC009238.1-201ENST00000442165 424 ntBASIC2.63□□□□□ -1.99
CTDP1Q9Y5B0 AC009237.6-201ENST00000446969 424 ntBASIC2.63□□□□□ -1.99
CTDP1Q9Y5B0 RNU6-437P-201ENST00000459408 95 ntBASIC2.63□□□□□ -1.99
CTDP1Q9Y5B0 SNORA31.25-201ENST00000517242 134 ntBASIC2.63□□□□□ -1.99
CTDP1Q9Y5B0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.63□□□□□ -1.99
CTDP1Q9Y5B0 MIR4438-201ENST00000585271 93 ntBASIC2.63□□□□□ -1.99
CTDP1Q9Y5B0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.63□□□□□ -1.99
CTDP1Q9Y5B0 MIR6132-201ENST00000622083 109 ntBASIC2.63□□□□□ -1.99
CTDP1Q9Y5B0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.63□□□□□ -1.99
CTDP1Q9Y5B0 RNU6-818P-201ENST00000364837 108 ntBASIC2.62□□□□□ -1.99
CTDP1Q9Y5B0 Y_RNA.332-201ENST00000365271 113 ntBASIC2.62□□□□□ -1.99
CTDP1Q9Y5B0 Y_RNA.337-201ENST00000365312 102 ntBASIC2.62□□□□□ -1.99
CTDP1Q9Y5B0 RNU6-136P-201ENST00000384663 107 ntBASIC2.62□□□□□ -1.99
CTDP1Q9Y5B0 Y_RNA.568-201ENST00000384742 113 ntBASIC2.62□□□□□ -1.99
CTDP1Q9Y5B0 MIR504-201ENST00000385065 83 ntBASIC2.62□□□□□ -1.99
CTDP1Q9Y5B0 MIR221-201ENST00000385135 110 ntBASIC2.62□□□□□ -1.99
CTDP1Q9Y5B0 SNORA11.4-201ENST00000408823 129 ntBASIC2.62□□□□□ -1.99
CTDP1Q9Y5B0 snoU13.15-201ENST00000459407 104 ntBASIC2.62□□□□□ -1.99
CTDP1Q9Y5B0 RNU2-19P-201ENST00000517288 84 ntBASIC2.62□□□□□ -1.99
CTDP1Q9Y5B0 AC015720.1-201ENST00000565251 277 ntBASIC2.62□□□□□ -1.99
CTDP1Q9Y5B0 MIR3126-201ENST00000577443 74 ntBASIC2.62□□□□□ -1.99
CTDP1Q9Y5B0 MIR548AI-201ENST00000579940 88 ntBASIC2.62□□□□□ -1.99
CTDP1Q9Y5B0 DNAJC19P2-201ENST00000593340 302 ntBASIC2.62□□□□□ -1.99
CTDP1Q9Y5B0 MIR7843-201ENST00000622274 79 ntBASIC2.62□□□□□ -1.99
CTDP1Q9Y5B0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CTDP1Q9Y5B0 AP006437.1-201ENST00000641440 3685 ntBASIC2.61□□□□□ -1.99
CTDP1Q9Y5B0 AL596028.1-201ENST00000326971 197 ntBASIC2.61□□□□□ -1.99
CTDP1Q9Y5B0 MIR21-201ENST00000362134 72 ntBASIC2.61□□□□□ -1.99
CTDP1Q9Y5B0 RNU1-22P-201ENST00000363334 158 ntBASIC2.61□□□□□ -1.99
CTDP1Q9Y5B0 RNU1-51P-201ENST00000365345 176 ntBASIC2.61□□□□□ -1.99
CTDP1Q9Y5B0 RNU6-117P-201ENST00000365415 107 ntBASIC2.61□□□□□ -1.99
CTDP1Q9Y5B0 RNU6-643P-201ENST00000384018 107 ntBASIC2.61□□□□□ -1.99
CTDP1Q9Y5B0 RNU2-48P-201ENST00000410694 191 ntBASIC2.61□□□□□ -1.99
CTDP1Q9Y5B0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.61□□□□□ -1.99
CTDP1Q9Y5B0 RNA5SP233-201ENST00000459153 113 ntBASIC2.61□□□□□ -1.99
CTDP1Q9Y5B0 RNU6-561P-201ENST00000516222 102 ntBASIC2.61□□□□□ -1.99
CTDP1Q9Y5B0 RNU6-426P-201ENST00000516464 97 ntBASIC2.61□□□□□ -1.99
CTDP1Q9Y5B0 MIR548X2-201ENST00000579776 100 ntBASIC2.61□□□□□ -1.99
CTDP1Q9Y5B0 AC007229.1-201ENST00000590455 412 ntBASIC2.61□□□□□ -1.99
CTDP1Q9Y5B0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.61□□□□□ -1.99
CTDP1Q9Y5B0 RNU4-41P-201ENST00000364426 143 ntBASIC2.6□□□□□ -1.99
CTDP1Q9Y5B0 RNU4-11P-201ENST00000365287 132 ntBASIC2.6□□□□□ -1.99
CTDP1Q9Y5B0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.6□□□□□ -1.99
CTDP1Q9Y5B0 RNY3P5-201ENST00000384127 102 ntBASIC2.6□□□□□ -1.99
CTDP1Q9Y5B0 AL512604.1-201ENST00000404812 257 ntBASIC2.6□□□□□ -1.99
CTDP1Q9Y5B0 AC055731.1-201ENST00000474387 401 ntBASIC2.6□□□□□ -1.99
CTDP1Q9Y5B0 RPS27P21-201ENST00000486977 252 ntBASIC2.6□□□□□ -1.99
CTDP1Q9Y5B0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.6□□□□□ -1.99
CTDP1Q9Y5B0 AC097462.1-201ENST00000514125 324 ntBASIC2.6□□□□□ -1.99
CTDP1Q9Y5B0 RNU6-856P-201ENST00000516959 98 ntBASIC2.6□□□□□ -1.99
CTDP1Q9Y5B0 RNU7-172P-201ENST00000517125 64 ntBASIC2.6□□□□□ -1.99
CTDP1Q9Y5B0 RNU6-667P-201ENST00000517186 102 ntBASIC2.6□□□□□ -1.99
CTDP1Q9Y5B0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CTDP1Q9Y5B0 MIR6766-201ENST00000622641 72 ntBASIC2.6□□□□□ -1.99
CTDP1Q9Y5B0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.6□□□□□ -1.99
CTDP1Q9Y5B0 MIR3658-201ENST00000636291 56 ntBASIC2.6□□□□□ -1.99
CTDP1Q9Y5B0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CTDP1Q9Y5B0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
CTDP1Q9Y5B0 RNU6-199P-201ENST00000362954 107 ntBASIC2.59□□□□□ -1.99
CTDP1Q9Y5B0 RNU6-674P-201ENST00000363831 107 ntBASIC2.59□□□□□ -1.99
CTDP1Q9Y5B0 SNORA72-201ENST00000384339 132 ntBASIC2.59□□□□□ -1.99
CTDP1Q9Y5B0 MIR17-201ENST00000385012 84 ntBASIC2.59□□□□□ -1.99
CTDP1Q9Y5B0 MIR569-201ENST00000385228 96 ntBASIC2.59□□□□□ -1.99
CTDP1Q9Y5B0 RNA5SP496-201ENST00000391240 109 ntBASIC2.59□□□□□ -1.99
CTDP1Q9Y5B0 MIR513C-201ENST00000401352 84 ntBASIC2.59□□□□□ -1.99
CTDP1Q9Y5B0 AL356379.1-201ENST00000414105 126 ntBASIC2.59□□□□□ -1.99
CTDP1Q9Y5B0 EDDM3CP-201ENST00000415977 425 ntBASIC2.59□□□□□ -1.99
CTDP1Q9Y5B0 HMGN2P34-201ENST00000437647 269 ntBASIC2.59□□□□□ -1.99
CTDP1Q9Y5B0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.59□□□□□ -1.99
CTDP1Q9Y5B0 RNU6-1117P-201ENST00000384525 104 ntBASIC2.58□□□□□ -2
CTDP1Q9Y5B0 RNU6-1081P-201ENST00000384537 107 ntBASIC2.58□□□□□ -2
CTDP1Q9Y5B0 SNORD37.2-201ENST00000391075 66 ntBASIC2.58□□□□□ -2
CTDP1Q9Y5B0 Y_RNA.587-201ENST00000391210 103 ntBASIC2.58□□□□□ -2
CTDP1Q9Y5B0 Y_RNA.622-201ENST00000411091 108 ntBASIC2.58□□□□□ -2
CTDP1Q9Y5B0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.58□□□□□ -2
CTDP1Q9Y5B0 RNA5SP272-201ENST00000516095 111 ntBASIC2.58□□□□□ -2
CTDP1Q9Y5B0 SNORA25.12-201ENST00000516202 82 ntBASIC2.58□□□□□ -2
CTDP1Q9Y5B0 RPL30P13-201ENST00000418873 348 ntBASIC2.57□□□□□ -2
CTDP1Q9Y5B0 AC060773.1-201ENST00000421698 310 ntBASIC2.57□□□□□ -2
CTDP1Q9Y5B0 RNU6-1146P-201ENST00000516282 102 ntBASIC2.57□□□□□ -2
CTDP1Q9Y5B0 U2.20-201ENST00000613956 192 ntBASIC2.57□□□□□ -2
CTDP1Q9Y5B0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.56□□□□□ -2
CTDP1Q9Y5B0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
CTDP1Q9Y5B0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CTDP1Q9Y5B0 MIR340-201ENST00000362125 95 ntBASIC2.56□□□□□ -2
CTDP1Q9Y5B0 Y_RNA.521-201ENST00000384560 114 ntBASIC2.56□□□□□ -2
CTDP1Q9Y5B0 SNORA79-201ENST00000408376 140 ntBASIC2.56□□□□□ -2
CTDP1Q9Y5B0 MIR1278-201ENST00000408753 81 ntBASIC2.56□□□□□ -2
CTDP1Q9Y5B0 RN7SKP101-201ENST00000411376 320 ntBASIC2.56□□□□□ -2
CTDP1Q9Y5B0 RPS4XP11-201ENST00000446897 772 ntBASIC2.56□□□□□ -2
CTDP1Q9Y5B0 AC079804.2-201ENST00000490376 200 ntBASIC2.56□□□□□ -2
CTDP1Q9Y5B0 AC018868.1-201ENST00000491307 315 ntBASIC2.56□□□□□ -2
CTDP1Q9Y5B0 AL031274.2-201ENST00000599419 203 ntBASIC2.56□□□□□ -2
CTDP1Q9Y5B0 AL929325.1-201ENST00000603096 117 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 291.6 ms