Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SNORA25.14-201ENST00000516481 132 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 RNU6-765P-201ENST00000516916 99 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 RNU7-188P-201ENST00000517063 64 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 SCARNA1-201ENST00000517138 166 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 AC131281.1-201ENST00000522984 164 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 MIR4324-201ENST00000584846 72 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 MIR6851-201ENST00000617060 67 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 AC022418.1-201ENST00000624118 445 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 AC068137.4-201ENST00000638485 296 ntBASIC-1.54□□□□□ -2.66
AP4S1Q9Y587 RNU6-550P-201ENST00000391057 101 ntBASIC-1.55□□□□□ -2.66
AP4S1Q9Y587 AC236972.2-201ENST00000434979 310 ntBASIC-1.55□□□□□ -2.66
AP4S1Q9Y587 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.55□□□□□ -2.66
AP4S1Q9Y587 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.56□□□□□ -2.66
AP4S1Q9Y587 MTND3P9-201ENST00000429526 346 ntBASIC-1.56□□□□□ -2.66
AP4S1Q9Y587 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.56□□□□□ -2.66
AP4S1Q9Y587 RNA5SP54-201ENST00000516951 92 ntBASIC-1.56□□□□□ -2.66
AP4S1Q9Y587 MTND2P32-201ENST00000521584 1038 ntBASIC-1.56□□□□□ -2.66
AP4S1Q9Y587 MIR4307-201ENST00000582802 84 ntBASIC-1.56□□□□□ -2.66
AP4S1Q9Y587 AL355297.3-201ENST00000604082 446 ntBASIC-1.56□□□□□ -2.66
AP4S1Q9Y587 RNU6-88P-201ENST00000606801 100 ntBASIC-1.56□□□□□ -2.66
AP4S1Q9Y587 MIR6738-201ENST00000619620 64 ntBASIC-1.56□□□□□ -2.66
AP4S1Q9Y587 RNU6-179P-201ENST00000363350 107 ntBASIC-1.57□□□□□ -2.66
AP4S1Q9Y587 RNU6-324P-201ENST00000363957 106 ntBASIC-1.57□□□□□ -2.66
AP4S1Q9Y587 SNORD115-44-201ENST00000365391 82 ntBASIC-1.57□□□□□ -2.66
AP4S1Q9Y587 Y_RNA.480-201ENST00000384364 102 ntBASIC-1.57□□□□□ -2.66
AP4S1Q9Y587 SNRPGP14-201ENST00000435400 219 ntBASIC-1.57□□□□□ -2.66
AP4S1Q9Y587 MTCO2P3-201ENST00000442543 421 ntBASIC-1.57□□□□□ -2.66
AP4S1Q9Y587 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.57□□□□□ -2.66
AP4S1Q9Y587 HSPE1P23-201ENST00000509838 286 ntBASIC-1.57□□□□□ -2.66
AP4S1Q9Y587 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.57□□□□□ -2.66
AP4S1Q9Y587 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.57□□□□□ -2.66
AP4S1Q9Y587 MTND5P18-201ENST00000445624 1801 ntBASIC-1.57□□□□□ -2.66
AP4S1Q9Y587 AL596211.1-201ENST00000569873 2277 ntBASIC-1.57□□□□□ -2.66
AP4S1Q9Y587 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.58□□□□□ -2.66
AP4S1Q9Y587 SNORD115-8-201ENST00000363856 82 ntBASIC-1.58□□□□□ -2.66
AP4S1Q9Y587 SNORD115-38-201ENST00000365037 82 ntBASIC-1.58□□□□□ -2.66
AP4S1Q9Y587 RNU6-24P-201ENST00000384440 107 ntBASIC-1.58□□□□□ -2.66
AP4S1Q9Y587 RNA5SP118-201ENST00000410385 109 ntBASIC-1.58□□□□□ -2.66
AP4S1Q9Y587 AC244505.6-201ENST00000452829 130 ntBASIC-1.58□□□□□ -2.66
AP4S1Q9Y587 MTND2P30-201ENST00000456663 382 ntBASIC-1.58□□□□□ -2.66
AP4S1Q9Y587 SNORA13-201ENST00000458790 133 ntBASIC-1.58□□□□□ -2.66
AP4S1Q9Y587 RN7SKP19-201ENST00000516016 252 ntBASIC-1.58□□□□□ -2.66
AP4S1Q9Y587 RNU7-161P-201ENST00000517289 62 ntBASIC-1.58□□□□□ -2.66
AP4S1Q9Y587 MTND1P35-201ENST00000526739 508 ntBASIC-1.58□□□□□ -2.66
AP4S1Q9Y587 AC140658.3-201ENST00000567603 271 ntBASIC-1.58□□□□□ -2.66
AP4S1Q9Y587 AC090616.2-202ENST00000584248 222 ntBASIC-1.58□□□□□ -2.66
AP4S1Q9Y587 AC011458.1-201ENST00000604034 617 ntBASIC-1.58□□□□□ -2.66
AP4S1Q9Y587 MIR8055-201ENST00000610739 97 ntBASIC-1.58□□□□□ -2.66
AP4S1Q9Y587 Z97988.1-201ENST00000637697 135 ntBASIC-1.58□□□□□ -2.66
AP4S1Q9Y587 RNU6-266P-201ENST00000364225 107 ntBASIC-1.59□□□□□ -2.66
AP4S1Q9Y587 SNORA24-201ENST00000384096 131 ntBASIC-1.59□□□□□ -2.66
AP4S1Q9Y587 SNORD12C-201ENST00000386307 89 ntBASIC-1.59□□□□□ -2.66
AP4S1Q9Y587 RNU6-131P-201ENST00000391144 107 ntBASIC-1.59□□□□□ -2.66
AP4S1Q9Y587 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.59□□□□□ -2.66
AP4S1Q9Y587 SCARNA18B-201ENST00000458806 135 ntBASIC-1.59□□□□□ -2.66
AP4S1Q9Y587 RNA5SP484-201ENST00000458857 111 ntBASIC-1.59□□□□□ -2.66
AP4S1Q9Y587 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.59□□□□□ -2.66
AP4S1Q9Y587 AP003072.1-201ENST00000531740 145 ntBASIC-1.59□□□□□ -2.66
AP4S1Q9Y587 AC024405.2-202ENST00000532731 184 ntBASIC-1.59□□□□□ -2.66
AP4S1Q9Y587 MIR3179-1-201ENST00000578940 84 ntBASIC-1.59□□□□□ -2.66
AP4S1Q9Y587 MIR3179-2-201ENST00000579107 84 ntBASIC-1.59□□□□□ -2.66
AP4S1Q9Y587 MIR3179-3-201ENST00000579566 84 ntBASIC-1.59□□□□□ -2.66
AP4S1Q9Y587 MIR3179-4-201ENST00000617599 84 ntBASIC-1.59□□□□□ -2.66
AP4S1Q9Y587 AL049777.1-201ENST00000622740 518 ntBASIC-1.59□□□□□ -2.66
AP4S1Q9Y587 AP002371.2-201ENST00000624450 503 ntBASIC-1.59□□□□□ -2.66
AP4S1Q9Y587 RNU6-502P-201ENST00000362419 108 ntBASIC-1.6□□□□□ -2.67
AP4S1Q9Y587 SNORA63.5-201ENST00000363548 123 ntBASIC-1.6□□□□□ -2.67
AP4S1Q9Y587 RNU6-560P-201ENST00000364007 108 ntBASIC-1.6□□□□□ -2.67
AP4S1Q9Y587 SNORA1.2-201ENST00000365189 134 ntBASIC-1.6□□□□□ -2.67
AP4S1Q9Y587 SNORD41.1-201ENST00000391000 69 ntBASIC-1.6□□□□□ -2.67
AP4S1Q9Y587 RNU6-602P-201ENST00000411155 105 ntBASIC-1.6□□□□□ -2.67
AP4S1Q9Y587 UQCRBP2-201ENST00000447827 297 ntBASIC-1.6□□□□□ -2.67
AP4S1Q9Y587 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.6□□□□□ -2.67
AP4S1Q9Y587 RNU6-107P-201ENST00000516643 102 ntBASIC-1.6□□□□□ -2.67
AP4S1Q9Y587 RNU6-175P-201ENST00000516896 107 ntBASIC-1.6□□□□□ -2.67
AP4S1Q9Y587 MIR4423-201ENST00000580922 80 ntBASIC-1.6□□□□□ -2.67
AP4S1Q9Y587 MIR4491-201ENST00000581087 68 ntBASIC-1.6□□□□□ -2.67
AP4S1Q9Y587 AC018462.2-201ENST00000605375 395 ntBASIC-1.6□□□□□ -2.67
AP4S1Q9Y587 AL136370.1-201ENST00000608166 691 ntBASIC-1.6□□□□□ -2.67
AP4S1Q9Y587 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.6□□□□□ -2.67
AP4S1Q9Y587 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.61□□□□□ -2.67
AP4S1Q9Y587 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.61□□□□□ -2.67
AP4S1Q9Y587 RNU6-865P-201ENST00000364772 107 ntBASIC-1.61□□□□□ -2.67
AP4S1Q9Y587 RNU6-901P-201ENST00000384593 106 ntBASIC-1.61□□□□□ -2.67
AP4S1Q9Y587 AC096949.1-201ENST00000412047 152 ntBASIC-1.61□□□□□ -2.67
AP4S1Q9Y587 AL008987.1-201ENST00000415528 237 ntBASIC-1.61□□□□□ -2.67
AP4S1Q9Y587 AC073464.1-201ENST00000429823 534 ntBASIC-1.61□□□□□ -2.67
AP4S1Q9Y587 HMGN1P33-201ENST00000432945 451 ntBASIC-1.61□□□□□ -2.67
AP4S1Q9Y587 RNU2-69P-201ENST00000516061 100 ntBASIC-1.61□□□□□ -2.67
AP4S1Q9Y587 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.61□□□□□ -2.67
AP4S1Q9Y587 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.62□□□□□ -2.67
AP4S1Q9Y587 SNORD14E-201ENST00000364009 85 ntBASIC-1.62□□□□□ -2.67
AP4S1Q9Y587 RNU4-16P-201ENST00000364737 141 ntBASIC-1.62□□□□□ -2.67
AP4S1Q9Y587 MIR517B-201ENST00000385102 67 ntBASIC-1.62□□□□□ -2.67
AP4S1Q9Y587 MT-TY-201ENST00000387409 66 ntBASIC-1.62□□□□□ -2.67
AP4S1Q9Y587 RNU6-913P-201ENST00000390913 95 ntBASIC-1.62□□□□□ -2.67
AP4S1Q9Y587 MTCYBP4-201ENST00000401524 249 ntBASIC-1.62□□□□□ -2.67
AP4S1Q9Y587 RNU6-757P-201ENST00000410334 100 ntBASIC-1.62□□□□□ -2.67
AP4S1Q9Y587 MTATP6P17-201ENST00000431030 672 ntBASIC-1.62□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms